Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3180 |
Symbol | |
ID | 4478243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3819635 |
End bp | 3820204 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727790 |
Product | GPR1/FUN34/yaaH family protein |
Protein accession | YP_870810 |
Protein GI | 117921618 |
COG category | [S] Function unknown |
COG ID | [COG1584] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGACGA AACTGGCGAA TCCTGCTCCA TTAGGTTTAA TGGGCTTTGG TATGACGACT ATCCTGCTGA ACATTCACAA TGCGGGCTAT TTTCCGATTG ATGCAATGAT CTTAGCGATG GGCATTTTCT ATGGCGGACT TGGCCAAATT ATTGTCGGCA TTATGTGTTT TATGCGGGGT GATACCTTTG GGACAACCGC ATTTACCTCC TACGGTTTAT TTTGGCTAAC CTTAGTCGGG CTGATTTTAA TGCCTAATGC CGGAATTGCG GCGAGCCCAA CTCACTTTAT GGGATGGTAT TTAACCCTGT GGGGGATCTT TACTGCTTTT ATGTTCGTCG GTTCGCTACG CTACCCAAGA GCGAAACAGT TTGTGTTTGC CTCGCTCACC ATTTTGTTCT TCCTGTTGGC GGCAAGAGAT TTCACTGGCA GCGCCTTAAT TGGCACTATC GCGGGTTTTG AAGGGATTAT CTGTGGCGCG AGTGCGATTT ACTTTGCCAT GGCGCAAGTG CTCAACAATG AATATGGTCG CACGATTTTG CCGATTGGTG AGTTAAAAGC AAAGGCTTAA
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Protein sequence | MSTKLANPAP LGLMGFGMTT ILLNIHNAGY FPIDAMILAM GIFYGGLGQI IVGIMCFMRG DTFGTTAFTS YGLFWLTLVG LILMPNAGIA ASPTHFMGWY LTLWGIFTAF MFVGSLRYPR AKQFVFASLT ILFFLLAARD FTGSALIGTI AGFEGIICGA SAIYFAMAQV LNNEYGRTIL PIGELKAKA
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