Gene Shewana3_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3180 
Symbol 
ID4478243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3819635 
End bp3820204 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID639727790 
ProductGPR1/FUN34/yaaH family protein 
Protein accessionYP_870810 
Protein GI117921618 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGACGA AACTGGCGAA TCCTGCTCCA TTAGGTTTAA TGGGCTTTGG TATGACGACT 
ATCCTGCTGA ACATTCACAA TGCGGGCTAT TTTCCGATTG ATGCAATGAT CTTAGCGATG
GGCATTTTCT ATGGCGGACT TGGCCAAATT ATTGTCGGCA TTATGTGTTT TATGCGGGGT
GATACCTTTG GGACAACCGC ATTTACCTCC TACGGTTTAT TTTGGCTAAC CTTAGTCGGG
CTGATTTTAA TGCCTAATGC CGGAATTGCG GCGAGCCCAA CTCACTTTAT GGGATGGTAT
TTAACCCTGT GGGGGATCTT TACTGCTTTT ATGTTCGTCG GTTCGCTACG CTACCCAAGA
GCGAAACAGT TTGTGTTTGC CTCGCTCACC ATTTTGTTCT TCCTGTTGGC GGCAAGAGAT
TTCACTGGCA GCGCCTTAAT TGGCACTATC GCGGGTTTTG AAGGGATTAT CTGTGGCGCG
AGTGCGATTT ACTTTGCCAT GGCGCAAGTG CTCAACAATG AATATGGTCG CACGATTTTG
CCGATTGGTG AGTTAAAAGC AAAGGCTTAA
 
Protein sequence
MSTKLANPAP LGLMGFGMTT ILLNIHNAGY FPIDAMILAM GIFYGGLGQI IVGIMCFMRG 
DTFGTTAFTS YGLFWLTLVG LILMPNAGIA ASPTHFMGWY LTLWGIFTAF MFVGSLRYPR
AKQFVFASLT ILFFLLAARD FTGSALIGTI AGFEGIICGA SAIYFAMAQV LNNEYGRTIL
PIGELKAKA