| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3133 |
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| Symbol | ispH |
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| ID | 4477727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3758789 |
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| End bp | 3759745 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639727737 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_870763 |
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| Protein GI | 117921571 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAG ATCCTACCAG CCCAAGTTTA AATATTATGC TGGCCAATCC TCGCGGCTTT
TGTGCTGGTG TGGATCGCGC CATTAGTATT GTTGAGCGCG CACTTGAGTT ATTTTCGCCG
CCGATTTATG TTCGCCATGA AGTGGTGCAT AACCGCTATG TAGTGCAAAA TCTGAAGGAC
CGCGGTGCCG TTTTTGTCGA AGAGTTAGAC CAAGTACCGG ATAACAATAT TGTTATCTTC
AGTGCTCATG GAGTTTCTCA GGCTGTGCGT GCCGAGGCTA AGGCGCGTGG GTTGCGTGTT
TTCGATGCGA CTTGTCCATT AGTCACCAAA GTGCATTTGC AGGTTACTCG AGCGAGCCGC
AAGGGGATTG AATGTATTTT GATTGGCCAT GAGGGACATC CAGAGGTGGA AGGCACCATG
GGGCAATACG ATAACCCTAA TGGTGGTGTT TATCTGATTG AATCTCCTGC GGATGTCGAA
ACTTTAGAAG TTCGTGATCC AAATAACCTC TGCTTCGTGA CTCAAACAAC GCTCTCGGTA
GATGATACCC TCGATATTAT CACCGCATTG CAAAAGCGTT TTCCTTCGAT TGAAGGTCCG
CGTAAGGATG ATATTTGTTA CGCGACGCAA AACCGTCAGG ATGCAGTGCG GAACTTATCG
GCCGATGTGG ATCTGTTAAT TGTGGTCGGC TCGAAAAACA GCTCTAACTC TAACCGCTTG
CGTGAATTGG CATTAAAGAC GGGGACTCAA TCTTATCTGG TTGATACCGC GGATGATATC
GATTCATCTT GGTTTGAAAA TGTGACTAAA GTTGCGGTGA CCGCAGGCGC ATCGGCACCA
GAAGTGCTGG TTCAGCAAGT GGTTCAAGCG ATTGCGAAAT TAGCACCGAG TGTCGTTACC
GAAGTTGAAG GACGTAAAGA AGATACCGTC TTTGCTGTAC CAGCGGAATT ACGCTAG
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| Protein sequence | MKLDPTSPSL NIMLANPRGF CAGVDRAISI VERALELFSP PIYVRHEVVH NRYVVQNLKD
RGAVFVEELD QVPDNNIVIF SAHGVSQAVR AEAKARGLRV FDATCPLVTK VHLQVTRASR
KGIECILIGH EGHPEVEGTM GQYDNPNGGV YLIESPADVE TLEVRDPNNL CFVTQTTLSV
DDTLDIITAL QKRFPSIEGP RKDDICYATQ NRQDAVRNLS ADVDLLIVVG SKNSSNSNRL
RELALKTGTQ SYLVDTADDI DSSWFENVTK VAVTAGASAP EVLVQQVVQA IAKLAPSVVT
EVEGRKEDTV FAVPAELR
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