Gene Shewana3_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3109 
Symbol 
ID4477825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3728801 
End bp3729523 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID639727713 
Producthypothetical protein 
Protein accessionYP_870739 
Protein GI117921547 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.052504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAACA ACCTAAATAA AAAACGGCTG GCACAAGTTG TTGGGCTCGC GCTGACGACC 
AGCTTATTCT CCGGCATTGC CGCCGCAGAA GTGTCGGGGG AAATTAGCGT AACCAATGAT
TATCGCTTCC GAGGCATCTC GCAAACCGCG GGCGATCCTG CGGTTCAAGG CGGTGTCGAT
TGGAGTTTTG AGTCCGGATT TTCGGTCGGC GCCTGGGCCA GTAATGTCGA CTTTGATGAG
CCAGGTTACA ACGGTCCAGA TATCGAGTAT GACTTCTATG TTGCCTACGG CGGTGACATC
AATGACAACG TCAGTTACGA CGTGACCCTC AACCGCTATA ACTATTCGGG TGAGAGTGAC
CTCGGCTATT TCGAAGTCAC AGCTGGCGTC GAGTTTAGCG GCTTTCGCGT AGCCTATTGG
TACACCAATG ATTACGGTGG CAGCGATTTA GATTATCACT ACGGCGAAAT CAATTACTCC
TATGAGTTTG TTGAAAACTG GAGCCTCGAT CTGCATTACG GCTACAACGT AGGCGATGCC
TTAGACGATG GTGAAGGCTT TGATAGCTAC TCGGATTATT CCGTCGGCGT ATCCACCGAA
TTTATGGGAT TTGGCCTGTC ACTCGCTTGG CTTGGCACCG ACTTGAGCGG CGATCAGAAA
GTCTCCGACG GTGTGTGGAA AAACGACGAT ACCGTATTAG CAAGCGTCAG TTACGCCTTC
TAA
 
Protein sequence
MNNNLNKKRL AQVVGLALTT SLFSGIAAAE VSGEISVTND YRFRGISQTA GDPAVQGGVD 
WSFESGFSVG AWASNVDFDE PGYNGPDIEY DFYVAYGGDI NDNVSYDVTL NRYNYSGESD
LGYFEVTAGV EFSGFRVAYW YTNDYGGSDL DYHYGEINYS YEFVENWSLD LHYGYNVGDA
LDDGEGFDSY SDYSVGVSTE FMGFGLSLAW LGTDLSGDQK VSDGVWKNDD TVLASVSYAF