Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3108 |
Symbol | |
ID | 4477824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3728256 |
End bp | 3728615 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639727712 |
Product | protein of unknown function DUF861, cupin_3 |
Protein accession | YP_870738 |
Protein GI | 117921546 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.312601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA CGTCGATCAT TCGCTTTGCT AGCGCACAGT CGCCGATGGA AAGTTACCAA GTTGCCCCAG AAAAGCGCAT CTCTGGTAAT CCCACCCAGC AATTACAGAA TCATTACTCT AGTCCCTGTA ATCAATTCCA CAGTGGAATT TGGCAAAGCG AATCAGGTGC TTGGAAAATC AACTACACTG AATACGAGTA TTGCGAGATC CTCGAAGGGA CCAGCGTCAT CACAGATCTT GAGGGGCAGT CACAAACCTT CACTGTCGGC GACCGATTTA TTATTCCTGC GGGGTTCCAA GGGCAGTGGC AAGTTGTAGA GCCCTGCCGC AAGGTTTATG TCATCTTCGA ACAAAAGTGA
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Protein sequence | MSITSIIRFA SAQSPMESYQ VAPEKRISGN PTQQLQNHYS SPCNQFHSGI WQSESGAWKI NYTEYEYCEI LEGTSVITDL EGQSQTFTVG DRFIIPAGFQ GQWQVVEPCR KVYVIFEQK
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