Gene Shewana3_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3108 
Symbol 
ID4477824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3728256 
End bp3728615 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content48% 
IMG OID639727712 
Productprotein of unknown function DUF861, cupin_3 
Protein accessionYP_870738 
Protein GI117921546 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.312601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA CGTCGATCAT TCGCTTTGCT AGCGCACAGT CGCCGATGGA AAGTTACCAA 
GTTGCCCCAG AAAAGCGCAT CTCTGGTAAT CCCACCCAGC AATTACAGAA TCATTACTCT
AGTCCCTGTA ATCAATTCCA CAGTGGAATT TGGCAAAGCG AATCAGGTGC TTGGAAAATC
AACTACACTG AATACGAGTA TTGCGAGATC CTCGAAGGGA CCAGCGTCAT CACAGATCTT
GAGGGGCAGT CACAAACCTT CACTGTCGGC GACCGATTTA TTATTCCTGC GGGGTTCCAA
GGGCAGTGGC AAGTTGTAGA GCCCTGCCGC AAGGTTTATG TCATCTTCGA ACAAAAGTGA
 
Protein sequence
MSITSIIRFA SAQSPMESYQ VAPEKRISGN PTQQLQNHYS SPCNQFHSGI WQSESGAWKI 
NYTEYEYCEI LEGTSVITDL EGQSQTFTVG DRFIIPAGFQ GQWQVVEPCR KVYVIFEQK