Gene Shewana3_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3104 
Symbol 
ID4477820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3723013 
End bp3723408 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content45% 
IMG OID639727708 
Productrare lipoprotein A 
Protein accessionYP_870734 
Protein GI117921542 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTCA AATACTTATC TTTGACCTTA ATGCTGCTAG CCACCTTGGC CTTATCGGGG 
TGTTCTTCTA CCCATTCGGG AAACTGGCAG GGGTTTACTG AATCTGGCCA AGCTTCTTTC
TACGGCGATA AACATCAAAA TAAGAAAACC GCCAGCGGTG AGCGTTATAA CCATAAATTA
AAAACGGCTG CCCATAAGGA AATTCCTTTT GGTTCAGTAG TTAAAGTCAC CAATCTTAAG
AACGGTAAAA CGGTTGTGGT TAAGGTCAAC GACAGGGGGC CTTTCGTGCG GGGCCGAATT
ATAGATTTGT CCAAATCCGC ATTTAGCAGC ATAGGCAATA CCTCGGCGGG TTTACTGGAT
GTTAAAATTG AAGTGATTCA AGCCGCGAGT CAGTAA
 
Protein sequence
MSLKYLSLTL MLLATLALSG CSSTHSGNWQ GFTESGQASF YGDKHQNKKT ASGERYNHKL 
KTAAHKEIPF GSVVKVTNLK NGKTVVVKVN DRGPFVRGRI IDLSKSAFSS IGNTSAGLLD
VKIEVIQAAS Q