Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3088 |
Symbol | |
ID | 4477804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3702013 |
End bp | 3704133 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639727692 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_870718 |
Protein GI | 117921526 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0193815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00820004 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCATT TGTCCATCAG TACTAAGTTG TTGTGGATCA CTTCCGCCTT ATTCCTCTCA ATTGTTGCCA TTCTTTCCAT CAGCCTCTGG TGGACCCTTT CGGATCAAAA CACAGAGCTG TCTAATCAGG TTCAAGAGAC ATTACAAACC GAAACCCGTG ACAAACTCGA AGCCCGTGCG GGCGAATATG GTGAAATGGT GGCGGGCTTT ATCAATGAAG CCTATCGGAT CCCGTACTCT TTTTCCGGCA TGTTAGAGAG CACTGCGGAA GAGTTGCCAT TAAAGCGTGA TCGCTTAGAG CTGGCCGTGG CGGCGGTATT AAAGAAAAAT AACCAGATAT CCTCCATGTA CGCGCAGTTT GAGCCTAATG GTTACGATGG GCTCGACAGT GAGTTTTTAA ATGTCGAGGT TAGCCATAGC GTCGCATCAT CGGGGTCATT GGAGGTGTAC TACACTCGCA ACGATGATGG CACGGTCGAA CATAATCAAG TAGATGATTC AGCAGAAAAA TATGTCACGA CCTTAAACGA GTTTGGGATC CGTGAAGCTG AATGGTATCT CTGTGCTAAG GAAACCTTAA AGCCTTGTTT GATGGAGCCC TATCTCTATG AAATCACCCC AGGTAATAAT GCGCTGATGA CCTCTTTAAC CGTGCCAGTG GTCAAGCATA AGCAGTTTAT TGGGGTGGTG GGCGTCGATG TGAACTTGCC CGTATTTCAG GCCCTAATCG ATAAATTGTC TAAGAGTCTT TACGACGGTC AAGCCAAGGT AACCTTACTC AGTACCCGTG GGTTAGTGGT TGCCGCGAGT CATTACAGCA AAAAAGCGCG CCCTCTGAGC GAATCTATCG ACCCTAAACT TGCCTCGCAG ATAGTCGCGT TACATAAAAA TGGCGGCTAT ATGGCAAACG ATGATGAGAT TATCGTGGCC TACCCGATAA AAATCCCACT GGCGAAAGCG GAATGGTCAT TGGCTATCCA AGTCCCTAAG GCTCAAGCCT TTAAGAGCTC CATTGAGTTG AATGACAAAA TGGATGAAAT GGCCACATCC CTTGGCAGCA TCTTGTTGAT GGTCGGTTTA GCCGTGTCTA TTCTCGCCGT GGTTACCATC AGCATAGTGA TCCGCAGCAT TATTGCGCCG CTCAAGATGA TCCAAGGCCG TGTGGAACAC TTGGCCAGTG CCGATGGTGA CTTAACCCAA TCCATTGTGG TCGATGCCCA TGCGGAACTG ATTGCACTGG GTAAAGGCTT CAACTCCTTT ATCCATAAGT TGAAAGACTT GATCAGCGAG TTAAAAACGC TTGCGGGACG CACCCAGGAA GAAAGCTTGT CTTCGGCGCA AATTGCGGAG TTGACCCACG ATAGTGTCCA TCGTCAGTAT GGCGAAATCG AGAGCGTGGT AACCGCGGTC AATGAGATGA GTGCTACGGC GCTTGAAGTG GCGAAAGCTT CTGAGCAAAC CGCTGCGGAA ACCGAAGCCA TGTCCCGCAA TGTACGTCTC AGTGAAGAGA GCCTGACTAA GGCCATGGAA TATGTGACTA CTATGTCGCA GGAGTCGATG CAGGCGAAAG TGGCTGTGAG CAAAGTGGCT GAAAGTAGCA CGAATATCAG CCGTATTCTC GAGGTGATCA GCTCTATTGC CGCGCAAACC AACTTGCTGG CTTTGAACGC CGCAATTGAG GCGGCGCGAG CCGGCGAACA AGGGCGGGGT TTTGCCGTGG TGGCCGATGA GGTGAGGGCG CTTGCCTCTA AAACCCAAAG TTCGACCGAT GATATCAGTG TGCTGATCGA TGCCCTGCAG CAAGAAGTAA ATAGTGCCTC AGGCATTATT GATAAAGGTG CTGAGCGCGC ACAAATGGCC GTGTCGCAAA CCGAGCAAGC ACTCACATCG CTTAATTCTA TGGTCAGTCA GATAGAGGAG ATTTCTTCTC AGGTGACGCA TATTGCCGCC GCCGCGGAGG AACAAAGCGC GGTAACGGAA GAAGTGAATC GTAATATCAC TGGGATTTCC GACTCGGCCT CGGAGCTGGC GCGCCTTGCG GGTGAAGCGC AGCAAAGCAG TGTGGTCCTT GCCGAACTGG TGAAACAGCA GCATCAACAA TTAGGTAAGC TGAAGACCTA A
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Protein sequence | MKHLSISTKL LWITSALFLS IVAILSISLW WTLSDQNTEL SNQVQETLQT ETRDKLEARA GEYGEMVAGF INEAYRIPYS FSGMLESTAE ELPLKRDRLE LAVAAVLKKN NQISSMYAQF EPNGYDGLDS EFLNVEVSHS VASSGSLEVY YTRNDDGTVE HNQVDDSAEK YVTTLNEFGI REAEWYLCAK ETLKPCLMEP YLYEITPGNN ALMTSLTVPV VKHKQFIGVV GVDVNLPVFQ ALIDKLSKSL YDGQAKVTLL STRGLVVAAS HYSKKARPLS ESIDPKLASQ IVALHKNGGY MANDDEIIVA YPIKIPLAKA EWSLAIQVPK AQAFKSSIEL NDKMDEMATS LGSILLMVGL AVSILAVVTI SIVIRSIIAP LKMIQGRVEH LASADGDLTQ SIVVDAHAEL IALGKGFNSF IHKLKDLISE LKTLAGRTQE ESLSSAQIAE LTHDSVHRQY GEIESVVTAV NEMSATALEV AKASEQTAAE TEAMSRNVRL SEESLTKAME YVTTMSQESM QAKVAVSKVA ESSTNISRIL EVISSIAAQT NLLALNAAIE AARAGEQGRG FAVVADEVRA LASKTQSSTD DISVLIDALQ QEVNSASGII DKGAERAQMA VSQTEQALTS LNSMVSQIEE ISSQVTHIAA AAEEQSAVTE EVNRNITGIS DSASELARLA GEAQQSSVVL AELVKQQHQQ LGKLKT
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