Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3084 |
Symbol | rpsU |
ID | 4477799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3696960 |
End bp | 3697175 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639727687 |
Product | 30S ribosomal protein S21 |
Protein accession | YP_870714 |
Protein GI | 117921522 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0828] Ribosomal protein S21 |
TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000168191 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000271061 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAATTA TTAAAGTACG TGAAAACGAA CCATTCGACG TAGCTCTGCG TCGTTTCAAG CGCTCTTGTG AAAAAGCTGG TATTTTAGCT GACGTGCGTG CTCGTGAATT CTACGAGAAG CCAACTACTG CACGTAAGCG CGCTAAAGCA GCTGCAGTTA AACGTTTAGC TAAAAAGCTT TCTCGCGAAA ACGCACGTCG CGTACGTTTA TACTAA
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Protein sequence | MPIIKVRENE PFDVALRRFK RSCEKAGILA DVRAREFYEK PTTARKRAKA AAVKRLAKKL SRENARRVRL Y
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