Gene Shewana3_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3082 
Symbol 
ID4477797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3694931 
End bp3695542 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content51% 
IMG OID639727685 
Productputative glycerol-3-phosphate acyltransferase PlsY 
Protein accessionYP_870712 
Protein GI117921520 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000753996 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000265088 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTCAAT TAACACTGAC ACTTTTGATG ATTGTGGCCG CCTATTTAGC CGGTTCTGTC 
TCAAGTGCTG TGCTAGTGTG TAGGATGAGA GGCCTACCCG ACCCCAGATT GCAAGGCTCA
GGCAACCCCG GAGCCACCAA TGTGCTGCGC ATTGGCGGCG CAAGCTCGGC TGCCATGGTG
TTATTTTTCG ATATGCTTAA GGGCGCCTTA CCCACTTATC TTGCCTATTT AATGGGAATC
GACGCCATTT CCCTCGGTCT GATCGCCATC GCCGCCTGTC TTGGGCACAT TTATCCGATA
TTTTTTGGTT TTAAAGGTGG CAAAGGCGTG GCGACAGCTT TTGGTGCTAT GGCACCGATT
GGCGATGACT TGGCCATCTG CTTGATGGCT TCTTGGGTTG TCTTAGTCCT GATCAGCCGC
TACTCTTCCC TCGCCGCGAT TATCACCGCC CTACTGGCGC CACTTTATAC TTGGTGGCTA
GATGACAGAT TTACGATCCC CGTCGCTATG CTCTCAACGC TGATTATCAT CCGTCATAAA
GAAAATATTC AGCGGTTGCT GAAAGGTGAA GAGTCTAAGG TGTCACGTAA AAAGCGTCCT
AAAGCACCTT AG
 
Protein sequence
MSQLTLTLLM IVAAYLAGSV SSAVLVCRMR GLPDPRLQGS GNPGATNVLR IGGASSAAMV 
LFFDMLKGAL PTYLAYLMGI DAISLGLIAI AACLGHIYPI FFGFKGGKGV ATAFGAMAPI
GDDLAICLMA SWVVLVLISR YSSLAAIITA LLAPLYTWWL DDRFTIPVAM LSTLIIIRHK
ENIQRLLKGE ESKVSRKKRP KAP