| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3042 |
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| Symbol | |
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| ID | 4478585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3645655 |
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| End bp | 3647889 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639727646 |
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| Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
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| Protein accession | YP_870673 |
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| Protein GI | 117921481 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00619839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.738534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAAATA CGCTCAGGGA TATTACTCAA GCTGTGGCGT CCGCCCACAG CTTAGAAACC
GCATTAGAAG TCCTAGTTTC ATCGACCAAA GCGGCGATGG AAACCCAATG TTGCTCGGTC
TACATCCTAG ATCAGCAAGA ACTCGTATTA TCAGCCACCG ATGGCCTCGA AAAGAGTGCC
GTTGGGCGCG TGCGCATGCC GTTAACCCAA GGCTTGGTTG GCTTGGCCGC CGAACGTGAA
GAAGCCGTAA ACCTTGCTGA TGCGCGTTTG CACCCACGCT TTAAGCTCTT CCCCGAAGTT
GCTGAAGAAG AATACCGTGC CTTTTTAGCC GTCCCCATTA TTTATCAAAA AGCCGTCGTC
GGCGTAATTG TGGTGCAGCA GGCCAGCGCG CGGCAATTTA GCGAAGGGGA AGAAGCCTTC
TTAATGACCT TGGCCGCGCA GCTCGCGATG GCGATCCGGG GATTAAAGCA AAAGGCGCAG
GTCAGTTCGC TGCATCAACA GATTTTATTT CAAGGAACCT CTGCATCCAG CGGTATCGCC
ATTGCCCATG CCTTGGTGCT CGGTGGCGAA ATCTCCCTCG AGCAGCCCGA TGTTCGCTGT
GAGGATATTG TCCTCGAATC CAGCCGATTA GTGGCGGCGA TGGGGCGTTG TAAAGAGGCT
ATTGGTGCCT TATCTCAACG TTTCGACCGT GAGCAGGATG AGGAAGTCGC CTCAATATTC
AATGCGTTGC AGCTGCTGCT CGATGATGTC AGCCTAGGTG GTGAATATGC TCGCGAAGTG
CAGCAGGGCT GGGAAGCAGA ATCGGCGGTT AGCCGTGTTT CGCTGCGTTA TATTCAACAG
TTTTTAGCGA TGGAAGATCC TTACCTCAAG GAGCGGGCGA GCGATATTCG GGATCTGGGG
CAAAAGGTAT TAAGGCAGTT AATCGAACCC GAGCGTTTAG AGCTTGAACC CGATAAGCCG
GTGATTCTAG TGACCCGTGA AGCGGATGCC ACTATGCTCG CCGAATTCCC TCGGCAAAAA
TTGGCCGGTA TTGTCACTGA ACTGGGAGGT GTTAACTCCC ACGCGGCGAT TTTAGCGCGC
GCACTGGGCG TACCTGCGAT TACTGGCGTC GAGCAGTTAT TGTCGGCCGA TATTGATCAG
AAGCTGTTAG TGGTCAATGC CAGCCGCGGG CAATTAATGG TGTCGCCATC GCCAGCGATT
GTTAGCGAAT ACCGCAGTTT GATTTCGGCG CAAAAGGCGT TGCAACGTCA ATACGCGCAG
GAGTTAGCCC TGCCGTCGGT CATGCTCGAT GGCACTCGCA TTCGGTTATA CCTTAACGCT
GGGTTACTCA GTGGTGTCGC TTCTGAAATT GCCGAAGGTG CCGATGGTAT CGGGCTGTAT
CGCACCGAAA TTCCCTTTAT GTTGCAGCAG CGTTTTCCGA GTGAGTCCGA GCAGGTAAAA
GTCTATCAGC AGGTGTTATC GGCGGCATCG GGTCGCCCTG TGGTGATGCG TACCTTAGAT
GTGGGAGGCG ATAAGCCGCT GCCTTATTTC CCTATTAAAG AAGATAACCC CTTCCTAGGT
TGGCGCGGTA TCCGCTTATC ATTGGATCAC CCAGAGCTAT TCCTCGTTCA GTTAAGAGCG
ATGTTGCAAG CGGGCGGAGA GTGCAAACAG CTCAGTATTT TACTGCCTAT GGTCAGTAAT
TTAGATGAGA TTGATCAATC CTTGGCCTAT CTAGAGCAGG CCTATGTTGA ACTCAAAAAC
GATGTGAACA GCCAGATTGA AATGCCGCGC ATTGGCATTA TGCTCGAAGT TCCAGCGCTG
TTATATCAGT TAGATGAAGT GGCAAAACGC GTCGATTTTG TGTCGGTCGG CAGTAACGAT
TTGACCCAAT ATTTACTCGC GGTGGACCGT AACAACCCAA GGGTGAGTTC CTTATTTGAT
AGTTATCATC CAGGCATTCT TCGGGCACTG CATCAGGCAA GACTCGATTG TGACTATCAT
GAACTCGATA TCAGTATCTG TGGCGAGCTG GCGGGGGAAC CCATGGGGGC GATTCTGTTG
GTGGCGATGG GATACCAGCA TTTGAGTATG AACCAAGGCA GTTTAGCGCG GATAAATTAC
CTGCTGCGCC GAGTGTCCCG CGCCGATTTG ACGCAACTCT TGTCGCAGGC CTTAAGTCTG
TCGAACGGTT TCCAAGTGCG TGAGTTGGTT AAAGAATATT TAACACAGCA GGGATTAGCC
ACAATTCTTA ATTAA
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| Protein sequence | MLNTLRDITQ AVASAHSLET ALEVLVSSTK AAMETQCCSV YILDQQELVL SATDGLEKSA
VGRVRMPLTQ GLVGLAAERE EAVNLADARL HPRFKLFPEV AEEEYRAFLA VPIIYQKAVV
GVIVVQQASA RQFSEGEEAF LMTLAAQLAM AIRGLKQKAQ VSSLHQQILF QGTSASSGIA
IAHALVLGGE ISLEQPDVRC EDIVLESSRL VAAMGRCKEA IGALSQRFDR EQDEEVASIF
NALQLLLDDV SLGGEYAREV QQGWEAESAV SRVSLRYIQQ FLAMEDPYLK ERASDIRDLG
QKVLRQLIEP ERLELEPDKP VILVTREADA TMLAEFPRQK LAGIVTELGG VNSHAAILAR
ALGVPAITGV EQLLSADIDQ KLLVVNASRG QLMVSPSPAI VSEYRSLISA QKALQRQYAQ
ELALPSVMLD GTRIRLYLNA GLLSGVASEI AEGADGIGLY RTEIPFMLQQ RFPSESEQVK
VYQQVLSAAS GRPVVMRTLD VGGDKPLPYF PIKEDNPFLG WRGIRLSLDH PELFLVQLRA
MLQAGGECKQ LSILLPMVSN LDEIDQSLAY LEQAYVELKN DVNSQIEMPR IGIMLEVPAL
LYQLDEVAKR VDFVSVGSND LTQYLLAVDR NNPRVSSLFD SYHPGILRAL HQARLDCDYH
ELDISICGEL AGEPMGAILL VAMGYQHLSM NQGSLARINY LLRRVSRADL TQLLSQALSL
SNGFQVRELV KEYLTQQGLA TILN
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