Gene Shewana3_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3040 
Symbol 
ID4478583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3643944 
End bp3644750 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content49% 
IMG OID639727644 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_870671 
Protein GI117921479 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.600526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGA ATTTTCCCAA TATCGATCCC GTGATCGTGA AGTTTGGTCC CTTTGATATT 
TTTGGACAAA CCTTTGAACC TGCCCTGCGT TGGTATGGAT TTACTTACCT AGTTGGCTTT
GTCGCCGCCA TGTGGTTACT CAATCGTCAG GCCGACCGCT CCAATGGTTT ATGGTCGAGG
GAACAGGTTT CCGATCTGCT GTTTTATGGC TTTTTAGGGG TGATTTTAGG TGGCCGTATC
GGCTATGTGC TCTTCTATCA TTTCGATTAC TTCCTCGCTA GCCCAATGTA TTTGTTTAAG
ATTTCAGAAG GTGGCATGTC TTTCCACGGC GGCTTGATGG GGGTGATTAC CGCCATGATT
TATATCGCCT GGAAGCAAAA GCGTACCTTC TTTGCGGTCG CAGACATGGT GGCGCCCGTG
GTGCCCATTG GCTTAGGTGC GGGGCGTATT GGTAACTTTA TCAATGGTGA GTTGTGGGGC
CGTGTCACCG ATGTCCCTTG GGCCATGGTG TTCCCAAGTG GTGGACCTGA ACCTCGTCAC
CCATCACAAC TCTATCAATT CGCCCTTGAA GGGGTGGCCT TATTCCTGCT CCTCTATTGG
TTCAGTAAAC GAACGAAGAA AGTCGGCGCC GTGTCGGGCA TGTTCTTACT CGGATACGGA
ATTTTCCGTG TGATTGTTGA AACCGTAAGA CAACCTGATG CGCAGTTAGG TCTCTACTGG
GGCTTTATGA CGATGGGGCA GATCCTCTCT GTGCCGATGA TCCTCTTCGG TTTATATTTA
ATTCTTCGTC CAGAGGGTAA GCAGTAA
 
Protein sequence
MALNFPNIDP VIVKFGPFDI FGQTFEPALR WYGFTYLVGF VAAMWLLNRQ ADRSNGLWSR 
EQVSDLLFYG FLGVILGGRI GYVLFYHFDY FLASPMYLFK ISEGGMSFHG GLMGVITAMI
YIAWKQKRTF FAVADMVAPV VPIGLGAGRI GNFINGELWG RVTDVPWAMV FPSGGPEPRH
PSQLYQFALE GVALFLLLYW FSKRTKKVGA VSGMFLLGYG IFRVIVETVR QPDAQLGLYW
GFMTMGQILS VPMILFGLYL ILRPEGKQ