Gene Shewana3_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3025 
Symbolera 
ID4478568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3630412 
End bp3631431 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content51% 
IMG OID639727629 
ProductGTP-binding protein Era 
Protein accessionYP_870656 
Protein GI117921464 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00436] GTP-binding protein Era
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.118015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAA AAACAGACTT GCCAGCTGTC GATGCCGCTA ACGCGAGCAA TGAGCCGAGC 
TTAGATGAAT TACTGGCAAG GATGAATGCA GCGAGCGCGG CGGCGCCGTC TGTTCACTAT
GATGTGACCT ACTGTGGCAT GGTGGCCATT ATTGGCCGCC CTAACGTGGG TAAATCGACC
CTGCTGAACC GTTTGCTTGG GCAAAAGATC AGTATTACCT CGAAAAAGCC GCAAACGACG
CGTCATCGCA TTATGGGTAT CCATACCGAT GGCCCGCGTC AAATCGTGTT TATCGACACG
CCTGGCCTGC ATATTGAAGA GCAGCGTGCG ATTAACCGTC TGATGAACCG CGCGGCGGCG
AGCTCGCTTG CCGATGTGTC TATGGTGATT TTTGTGGTCG ATGGTATGAC ATGGACCGCC
GATGATGAAA TGGTGTTAAG CAAACTTCGC CGTGGCGGTG AAGAACGTAA AACCGTGTTA
GCCATCAACA AAGTCGATAA TATCAAAGAC AAAGAAGCCC TTTTCCCCTA TTTGGAAGAA
GTGGCCAAGA AGTATCCCTT CGATGAAATT CTGCCGATTT CTGCCAGCAA AGGCACCAAC
GTAAAGCGCA TTTTAGAGAT GGCGGCAGAG TCGCTGCCCG AGAATCCGTT CTTCTTTCCT
GAAGATTATG TGACTGACCG TTCGCAGCGT TTTATGGCCT CTGAAATTGT CCGTGAAAAA
CTGATGCGCT TCCTCGGTGA TGAATTGCCC TACGATGCGA CGGTTGAAAT CGAGCAGTTT
AAGATGATGG AAAACGGCGT TTATCAAATC AATGCCCTGA TCCTCGTCGA GCGTGAAGGC
CAAAAGCGGA TGGTGATTGG TAGCAAAGGC GAGCGCATTC GTACCATCGC TACGCAAGCG
CGCCTCGATA TGGAAACCTT GTTTGATAAC AAAGTGTTCC TCGAGGTGTG GGTAAAGGTC
AAATCCGGTT GGGCCGATGA TGAGCGCGCC CTGCGAAGCT TAGGTTACGG TGACGATTAA
 
Protein sequence
MTKKTDLPAV DAANASNEPS LDELLARMNA ASAAAPSVHY DVTYCGMVAI IGRPNVGKST 
LLNRLLGQKI SITSKKPQTT RHRIMGIHTD GPRQIVFIDT PGLHIEEQRA INRLMNRAAA
SSLADVSMVI FVVDGMTWTA DDEMVLSKLR RGGEERKTVL AINKVDNIKD KEALFPYLEE
VAKKYPFDEI LPISASKGTN VKRILEMAAE SLPENPFFFP EDYVTDRSQR FMASEIVREK
LMRFLGDELP YDATVEIEQF KMMENGVYQI NALILVEREG QKRMVIGSKG ERIRTIATQA
RLDMETLFDN KVFLEVWVKV KSGWADDERA LRSLGYGDD