Gene Shewana3_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3023 
Symbol 
ID4478566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3628834 
End bp3629571 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content52% 
IMG OID639727627 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_870654 
Protein GI117921462 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.316333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTA TCTTATTGGG TGTTAATATC GACCATATTG CGACCCTGCG TCAGGCTCGC 
GGCACCAGTT ATCCTGATCC TGTCCATGCA GCGGCGGTTG CCGAGCATGC GGGTGCCGAC
GGTATCACGA TTCATTTACG GGAAGACAGA CGTCATATTA TCGACCGCGA TGTGTATCTG
CTGGCGAAAA CCTTAAAGAC GCGGATGAAC TTTGAGTGTG CCGTGACAGA AGAAATGCTC
AACATCGCCT GTGAAGTCAA ACCGACCTAC GTTTGCTTAG TCCCTGAAAA ACGTCAAGAA
GTGACGACCG AAGGTGGGTT AGATGTGGCT GGTCAACTAG ATAAAATCAC TGCCGCGGTA
AGCCGTTTAG CCGCCAATCG TATCCAAGTG TCACTGTTTA TCGATGCCGA TAAGACGCAA
ATCGATGCCG CCGTCGCCGC TGGCGCGCCA CTTATCGAAA TTCATACCGG TTGCTATGCC
GACGCTAAAA CCGCTGAAGA AGAAGCCAAA GAGCTTGCAC GTATCAGCGA AATGGCAAAA
TACGCCCATG GCAAAGGCTT AGTCGTGAAT GCGGGCCACG GGCTGCATTA CCACAATGTT
AAGCCGATTG CGGCGATCCC AGAGCTGTAT GAACTCAATA TTGGCCATGC CATTGTCGCG
CGAGCGGCCA TTGATGGCTT AGCGACAGCG GTTAAAGACA TGAAAGCGCT GATGTTAGAA
GGTCGTCGAG GCGAATAA
 
Protein sequence
MSRILLGVNI DHIATLRQAR GTSYPDPVHA AAVAEHAGAD GITIHLREDR RHIIDRDVYL 
LAKTLKTRMN FECAVTEEML NIACEVKPTY VCLVPEKRQE VTTEGGLDVA GQLDKITAAV
SRLAANRIQV SLFIDADKTQ IDAAVAAGAP LIEIHTGCYA DAKTAEEEAK ELARISEMAK
YAHGKGLVVN AGHGLHYHNV KPIAAIPELY ELNIGHAIVA RAAIDGLATA VKDMKALMLE
GRRGE