Gene Shewana3_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3011 
Symbol 
ID4478554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3617215 
End bp3618879 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content47% 
IMG OID639727615 
Producthydroxylamine reductase 
Protein accessionYP_870642 
Protein GI117921450 
COG category[C] Energy production and conversion 
COG ID[COG1151] 6Fe-6S prismane cluster-containing protein 
TIGRFAM ID[TIGR01703] hydroxylamine reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTGTA TTCAGTGTGA GCAAACTATT CGTACCCCAG CTGGCAACGG TTGTAGCTAT 
GCCCAAGGCA TGTGTGGCAA ATTGGCCGCG ACCTCGGATC TGCAAGATTT GTTAATCTAT
ATGCTGCAGG GTGTTTCAGT GTATGCGACT AAGGCGCGTG AACTGGGCGT CATTAACCCT
GAGGTGGATA CCTTTGTTCC TAAAGCTTTT TTCTCAACCT TAACCAACGT TAACTTCGAT
GATGAACGCA TCATCGCCTA TGCCAAGCAG GCCGCTGAAT ACCGTGAAAG TTTAAAAAAT
GCCTATGAAG CGGCGTGTGA AGCTGCGGGT AAACGGGCTG AATCACTCCC TCCTGTGGCG
CAATTTGTAC TGGGTACCAG CAAGCCCGAA ATGTTGTCTC AAGCACCAGT CGCCTTACTC
AATAAAGATA AAAATGAGAT CCACGAAGAT ATCCTTGGGC TGAGACTACT GTGCTTATAT
GGCCTTAAAG GGGCTGCGGC TTACATGGAG CACGCCCGTG TTTTAGGTAA AACCGATGCT
GAGATTGCTG GTCGCTTCCA TGAAATCATG GCGTTTCTTG GTGAGCCGAG TGTCGATGCC
GATAAACTGT TCACTACAGC CATGGATATT GGTCAGCTGA ACTACCGTAT CATGGCCATG
CTCGATGCGG GCGAGACCGA AGCCTTTGGT CATCCTGAAC CGACTGTCGT CAACACTAAA
CCGGTAAAAG GCAAAGCGAT TCTGGTTTCT GGCCATGATA TGAAGGACTT AGAGCTTATC
CTCGAGCAAA CGGCGGGCAA AGGCATTAAT GTTTATACCC ATGGTGAAAT GCTGCCTGCG
CTTGCGTATC CCGCCTTTAA AAAATATGCC CATTTAGTAG GTAACTACGG CAGTGCATGG
CAGAACCAGC AAAAAGAATT CGCTAATTTC CCCGGCGCTG TAGTGATGAC CTCAAACTGT
ATTATCGACC CGAATGTGGG CCAATATAGT GACCGTATCT TTACCCGCAG TATCGTGGGT
TGGCCTGGTG TGACCCATGT AATTGGGGAT GATTTTTCAG TTGTGATCGA CAAGGCTCTT
TCACTTGATG GCTTCCAATA CGATGAAATT CCACACAATA TCACCATCGG TTTTGCCCGT
AATGCCTTAA TGGCCGCAGC ACCGACTGTG GTGGAAAACG TCAAAAACGG TTCTATCAAA
CACTTCTTCT TAGTCGGAGG TTGTGATGGT GATAAGTCGG AGCGGAGTTA TTTCACCGAT
TTAGCGAAAT CGGCGCCAAA GGATTCCGTC ATCCTGACCT TAGGTTGTGG TAAGTACAAA
TTCAACAAGC TGGAATTTGG CGATATCAAC GGTATTCCGC GCTTACTCGA CATTGGCCAA
TGTAACGATG CCTATTCGGC TATTCAGTTA GCTATTGCAC TATCACAAAT CTTTGAATGC
GATATCAATG AATTACCATT GAACCTCGTG CTTTCATGGT TTGAGCAAAA AGCCATTGTC
GTGCTACTGA CGCTGTTGTC GCTCGGGGTG AAAAACATCC GCACCGGCCC AACGCCGCCA
GCGTTTTTAA CGGCTAATCT TGCCAAAATT TTGGAAGAAA AATTTGGTCT GCGTAACACC
ACCACAGTTG AAGCCGATCT GAAGACCATG CTGAACGTGG CCTAG
 
Protein sequence
MFCIQCEQTI RTPAGNGCSY AQGMCGKLAA TSDLQDLLIY MLQGVSVYAT KARELGVINP 
EVDTFVPKAF FSTLTNVNFD DERIIAYAKQ AAEYRESLKN AYEAACEAAG KRAESLPPVA
QFVLGTSKPE MLSQAPVALL NKDKNEIHED ILGLRLLCLY GLKGAAAYME HARVLGKTDA
EIAGRFHEIM AFLGEPSVDA DKLFTTAMDI GQLNYRIMAM LDAGETEAFG HPEPTVVNTK
PVKGKAILVS GHDMKDLELI LEQTAGKGIN VYTHGEMLPA LAYPAFKKYA HLVGNYGSAW
QNQQKEFANF PGAVVMTSNC IIDPNVGQYS DRIFTRSIVG WPGVTHVIGD DFSVVIDKAL
SLDGFQYDEI PHNITIGFAR NALMAAAPTV VENVKNGSIK HFFLVGGCDG DKSERSYFTD
LAKSAPKDSV ILTLGCGKYK FNKLEFGDIN GIPRLLDIGQ CNDAYSAIQL AIALSQIFEC
DINELPLNLV LSWFEQKAIV VLLTLLSLGV KNIRTGPTPP AFLTANLAKI LEEKFGLRNT
TTVEADLKTM LNVA