Gene Shewana3_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3010 
Symbol 
ID4478553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3616021 
End bp3617163 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content48% 
IMG OID639727614 
Productoxidoreductase FAD-binding subunit 
Protein accessionYP_870641 
Protein GI117921449 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACAA AGACGATGAA TATCAGTACT ATGCAAAATA TCATGCCAAG TCCCGCTTTA 
TCTTCTGCGC CTGCAAGTGT TGTGGGTTTT AGCCAGTTAG TGTGTGTGGA GCGCTGGAAC
GAAACCGCCG ATGTGGTGAG TTTTCGTTTT CAAGCCGGTG AGCCGATGAA GTTTGATTAT
AAGCCGGGGC AATTTATGAC CTTAGTGCTA GAGATCAATG GTGAGCAGGC TTGCCGCAGT
TACACCTTGT CCTCAACCCC TTCGAGACCT TATTCCTTAA TGTTAACCAT TAAGCGAGTC
GATGGCGGAC TGGTGTCGAA TTACTTGATT GATCATTTAC AGCCGGGGCA AACGGTACGC
GTCTTACCGC CAACCGGGCA GTTTAATCTG TTTGATATTC CTGCCAAAAA ATACCTATTT
TTGAGTGCAG GCTGTGGGAT CACGCCCATG TATTCGATGT CGCGTTATTT AACCGACAGC
CAAATGAATG CTGACATTGC CTTTGTGCAC AGCGCTCGTA CCCAGGCCGA TATTATTTTT
AAAACCTCAT TAGAGACCAT GGCTACGCGC CATCGAGATT TTAAGCTGCG TTATATTGTT
GAGGATGTCA CCGCTGACAC GGCTTGGCAT CCCGAGGCGG TATTGCATAA TGTCGGCCGT
TTAAGACCTG ATAATCTACG AGATTTAGTC CCCGACTTTG CCGAGCGAAC CGTGTTTTTG
TGCGGACCAG AGCCTTATAT GCAGGCGGTC AAAACGATTC TAGCTGAGCT TAACTTCGAT
ATGACTCAGT TGTATCACGA GAGTTTTGCT ACTGCGGTGA AAGAGGCGCA ATCCCGCGTA
AAACAGGCCG AAATGCAGAC TGAAGCTCCT GAGAGTGGTA GCAACAGTTT TATGTTATCT
ATTGGCGATA AAAAGCGGGC TTTAACGGCC GAGCAAACCT TGCTTGAGGG GATTGAAGCC
GAAGGTTTGC CGATAATTGC GGCCTGTCGC TCGGGCGTAT GCGGTGCGTG CAAATGCCAA
GTGCTCGAAG GGGAGACCGA GTCCACAAGT AGCATGACCT TAACACCTAG CGAAATCGAA
GCCGGATATG TGTTAGCTTG CTCGACTAAA CTCAAATCGG ATGTAACGCT GTCTTTGACC
TGA
 
Protein sequence
MDTKTMNIST MQNIMPSPAL SSAPASVVGF SQLVCVERWN ETADVVSFRF QAGEPMKFDY 
KPGQFMTLVL EINGEQACRS YTLSSTPSRP YSLMLTIKRV DGGLVSNYLI DHLQPGQTVR
VLPPTGQFNL FDIPAKKYLF LSAGCGITPM YSMSRYLTDS QMNADIAFVH SARTQADIIF
KTSLETMATR HRDFKLRYIV EDVTADTAWH PEAVLHNVGR LRPDNLRDLV PDFAERTVFL
CGPEPYMQAV KTILAELNFD MTQLYHESFA TAVKEAQSRV KQAEMQTEAP ESGSNSFMLS
IGDKKRALTA EQTLLEGIEA EGLPIIAACR SGVCGACKCQ VLEGETESTS SMTLTPSEIE
AGYVLACSTK LKSDVTLSLT