Gene Shewana3_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2962 
Symbol 
ID4478170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3557387 
End bp3558514 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content46% 
IMG OID639727567 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_870594 
Protein GI117921402 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAA ACATGACATG GTATCCCGAT CAACCGCACA ACGCGCTGCC AGTATTGCCA 
CCAGCGCTTG AGAGTATTGA AACGCGCGCG GTGCTCAAAG CTTGTATTCC TGCTAGAGCG
GCCCTTGCTG AATTAAAGCA AGCGGGTGAG TTATTGCCTA ATCAAGGCCT ACTCATCAAC
TTGCTGCCAT TACTAGAAGC GAAAGATAGT TCTGAAATTG AAAACATCGT TACAACCACC
GATAAGTTAT TTCAGTATTC CCAAGAAGAC ACTGGCGCCG ATCCTGCAAC CAAAGAGGCG
CTTCGTTACC GTAGTGCCTT GAATCAAGGC TTTCATCAAT TATCACAGCG CCCGTTGTGT
GTAACCACTG CAATTGAAAT CTGCAGCACA CTCAAAGATA CCGATATGGA AATCCGCCGT
ATTCCAGGCA CCACGATCAG CAATCAAACT ACTGGTGAAG TCATTTACAC CCCACCAGCA
GGTGAAGCGG TGATCCGCGA TTTGCTAAGT AATTGGGAAA AGTTTATTCA CACTGAAGAT
GACATAGACC CATTGGTAAA AATGGCCATT GCGCACTACC AGTTTGAAGC CATTCACCCG
TTTTATGATG GTAACGGCAG ATCCGGCCGC ATTCTCAATG TATTGTTTTT GATTGAGCAG
CAATTACTAA CCTTGCCGAT TTTATACCTC AGCCGCTACA TAGTGCAGCA TAAGGCGGAT
TATTACCGGC TGCTTAATCA AGTGACCCGC GAAGGTGACT GGCAATCATG GTTGCTGTTT
ATGCTCAAAG GCGTAGAGCA AATGGCCAGT TGGACCTGCG GCAAAATTGC CGCCGTGCGT
GAGTTAATGG AGCAGACCAG TGAATATGTA AGAACGGCTT TGCCCAAAAT CTACAGCCAC
GAACTGGTAC AAGTGATTTT CGAGCAGCCT TACTGTCGTA TCGGTAACTT AGTCGAGCGT
GACATAGCTA AACGTCAAAC CGCATCTGTG TATTTAAAAC AGTTGGCAGA CATCGGCGTA
TTAGAAGAGT TAACCATCGG TAAAGAAAAG CTATTTGTGC ACCCTAAACT GATGCAATTG
ATGACGCGCG ATAGCAACCA AATTAAGCCG TACACCATGG CCGAATAA
 
Protein sequence
MDLNMTWYPD QPHNALPVLP PALESIETRA VLKACIPARA ALAELKQAGE LLPNQGLLIN 
LLPLLEAKDS SEIENIVTTT DKLFQYSQED TGADPATKEA LRYRSALNQG FHQLSQRPLC
VTTAIEICST LKDTDMEIRR IPGTTISNQT TGEVIYTPPA GEAVIRDLLS NWEKFIHTED
DIDPLVKMAI AHYQFEAIHP FYDGNGRSGR ILNVLFLIEQ QLLTLPILYL SRYIVQHKAD
YYRLLNQVTR EGDWQSWLLF MLKGVEQMAS WTCGKIAAVR ELMEQTSEYV RTALPKIYSH
ELVQVIFEQP YCRIGNLVER DIAKRQTASV YLKQLADIGV LEELTIGKEK LFVHPKLMQL
MTRDSNQIKP YTMAE