| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2862 |
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| Symbol | |
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| ID | 4478737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3421055 |
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| End bp | 3423268 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727468 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_870495 |
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| Protein GI | 117921303 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0664764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATATC AACCTAAGAG CAGGATATCA AAAGCAATCA TGGGCTGTTT GGGCTTAAGC
GTATTACCCG CGTTGCCACT CAATGCCAAG GAAGTATTGG GAGCGCCTAA GGTCGAGCCA
ATCGAGATTT TACAAGTACA TGGCCAGCAA TACCGCCGAG CGACCACAAT GACTAAGCCG
GGCGAGGCGA TCATCTCGAT GGAGCAGATT GAAGAGATGC AAGCGACCAC ATTTGCTGAA
GTCATCGATG ATATGGCTGG TGCCCATATT GATGGCGGGA CTCGCAGTGG TGGCGAGCGC
ATCAACCTGT GGGGATTTGG CGAAACCGAA GATTTTAATA TTTATGTCGA TAACGCCCCC
GTGGGATTTG AGCAGTATCG TTATGGCTCG TTCTTCTTAG ATCCCGATTT AATCAAGCGA
GTCGAAGTGA TTAAAGGGGC CCACGATGTC CGCTCGGGTA ATGGCGGATT TGGCGGCTCC
ATGTATGTTG TGACTAAATC TGCCGATGAT TTTTTAAATT ACAATCAAAA CGTTGGTGCC
CGAATCAAAG CCAGTTACGC CAGTAATAAC GACGCCCAAA GCTACACAGG AACCCTTTAT
GGACGAGCTA ATAAACAACT TTCAGGTTTA TTGCATGTCA CTCGCCGTGA TGCGGGGGAT
GTGACGCTTG CCAATGGTGA CGAATTTGAA TACTCAGGTT ATGAGCAAAA TAATTACCTC
GGCAAACTGG ATTACGAGCA GGGCGACCAT CAACTCATGC TGAGCCTGAC CCATTATCTC
GACGAAGGGC GTAAGCCATG GGCCAATCGT CGTGGACCTA TGCCCGCAAT TTCTGACTAC
AACATCCGTA AATATGGCTC CTATGAACAG GCGCTCTATG CCACCACGGC CTACAACACC
TATGAAGACA ATACTTGGTC GGCGAATTAT CGCTATTCAC CGAGTAATCC TTTAATTGAT
ACCCAGATAG TGATTTCTCA TTCTGCCAAT GCGCGTCACT GGATCAGGCC GCCAATCGCG
TGGGAAAAGA TGACCGTCTC AGTCGGCAAT TTCGGCCATG AATCTTGGTT GGATTACAAG
CGTGACTACA TTGACATCAA CAACTTAAGT GTTATTGGGG ATCATGAGAT CACCACGGGG
TTGCAGTTCC GCAGTCTCGA TAGGGATTCA ATGGTGTTTA ACAAAAGTTA TGAGAAAAAT
CCCGAGAAAA ACTACGGTTG GTACACCCCT TACTATCAGC CCGAAGGGCG TCAGGATACC
TATGCAGTGT ATTTGCGCGA TGCGATTAGT GTGACAGATG AGCTGACTAT TACTCCTTCG
CTACGCTATG ACTTTATCTA CAGCATTGGC CGTCCCAACA TTGCCCCCGA TTACAACGAT
ATCGAGGCAG GGCACGACTA CAGCTCGACC CACCATTCGG GCTTTTCACC GCGATTGGGA
ATCGACTACC AGTTAACTGC GAATACTCGA GTGAATTTCG ATTACGCCTA CAGTTTACAA
GCGCCAGTGG TCGATGAAAT CTATGCGGTG CAATACGCCA AGGCGAGCAT TACCGGCACG
AGTCGAGATA TCGATGTAGA GCGTCTGCAC GCCTTTAAAC TGGGCTTGAT GACACAGCAA
ATCAGCCTTT TTGCCGCCCA AGATACGCTT TCAACCCAAG TGACCCTCTT TGCTAACTTA
GGGCGGGATG ATATTGCCCA GCGCCGCGGG GCAAAGTCCG ACCCCAATCA AGTGATTCAA
AGTGGTTACA CCAATCTTGA CGGCTATGAG ATCTACGGCG CCGATCTCGA GTCCCAATAC
CGTTATCAGG ATTTCTTCAG TGACTTAGCC GTTTCTTGGT TACAGGGCGA ACACAGGGGA
TCGCTCAGAG ACAGCCAAGG CGAGGACGAA TACCTTGCCA ATATTGCGCC GCTGGATATT
CGTCTGCGTG TGGGCATGTA CATTACCGAT GACATTTCAG TCGCTTGGCA AGGTACTTGG
TACGATGCGC AGGATAATGT GCCTCAGGGG GATATCTTTA ACGCTGAGTC CCCAAGTGAG
AATTACTTCT TACAAAATAT ATATTTAGCC TACGAGCCTC AAGAAACACT GAAAGGGCTA
AGTGTGCGCT TAATGGCAAA AAATCTGACG AACCAGCAAG TGACGCCGTT TCTGTCGGAT
GGCATCCCCG CGCCGGGGCG AGATGTCAGA CTCAGTTTAG CTTATGAATT TTAA
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| Protein sequence | MGYQPKSRIS KAIMGCLGLS VLPALPLNAK EVLGAPKVEP IEILQVHGQQ YRRATTMTKP
GEAIISMEQI EEMQATTFAE VIDDMAGAHI DGGTRSGGER INLWGFGETE DFNIYVDNAP
VGFEQYRYGS FFLDPDLIKR VEVIKGAHDV RSGNGGFGGS MYVVTKSADD FLNYNQNVGA
RIKASYASNN DAQSYTGTLY GRANKQLSGL LHVTRRDAGD VTLANGDEFE YSGYEQNNYL
GKLDYEQGDH QLMLSLTHYL DEGRKPWANR RGPMPAISDY NIRKYGSYEQ ALYATTAYNT
YEDNTWSANY RYSPSNPLID TQIVISHSAN ARHWIRPPIA WEKMTVSVGN FGHESWLDYK
RDYIDINNLS VIGDHEITTG LQFRSLDRDS MVFNKSYEKN PEKNYGWYTP YYQPEGRQDT
YAVYLRDAIS VTDELTITPS LRYDFIYSIG RPNIAPDYND IEAGHDYSST HHSGFSPRLG
IDYQLTANTR VNFDYAYSLQ APVVDEIYAV QYAKASITGT SRDIDVERLH AFKLGLMTQQ
ISLFAAQDTL STQVTLFANL GRDDIAQRRG AKSDPNQVIQ SGYTNLDGYE IYGADLESQY
RYQDFFSDLA VSWLQGEHRG SLRDSQGEDE YLANIAPLDI RLRVGMYITD DISVAWQGTW
YDAQDNVPQG DIFNAESPSE NYFLQNIYLA YEPQETLKGL SVRLMAKNLT NQQVTPFLSD
GIPAPGRDVR LSLAYEF
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