Gene Shewana3_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2839 
Symbol 
ID4479827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3385466 
End bp3386335 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content50% 
IMG OID639727445 
Producttranscriptional regulator, putative 
Protein accessionYP_870472 
Protein GI117921280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTC GAAAAGTGGG TACTCAAGCC GCGGATCATG CTCAGGCTGA TAAGCCAAAC 
TCGGAGCACA AATCCGCCCC CAAAACGGCT AGGCACCGCA ATGCCACAAC CACGCCGGAG
ATGCGACACT TTATTCAGCA ATCTGAATTA AGTGTGAGTC AGCTTGCCAA AATTTTAAAT
ATTACTGAAG CGACCGTGCG TAAATGGCGC AAGCGCGAGT CGGTAAACGA CAGCCCGAAT
ACCCCGCATC ACCTCAATAC CACCCTCACG CCGATGGAAG AATACGTGGT AGTGGGACTG
AGATATCAGC TTAAACTGCC ATTAGATAGG CTGCTCAAGG CCACTCAAAC CTTTATCAAC
CCCAATGTGT CCCGCTCGGG ATTAGCCCGC TGCCTTAAGC GTTATGGAGT TTCGCGCCTC
GATGAGTTTG ATCAAGAGCT CGTGCCAAAA CAATATTTTA ATCAATTACC TATCAGCCAA
GGCAGCGATG TTCAGACCTA CACGGTTAAC TCCGAAACCT TGGCCAAGGC GCTTGCCCTG
CCAAGTACCG ATGGCGATAC CGTAGTGCAA GTGGTGTCCC TCACCCTGCC GCCGCAATTG
ACCGAGGCCG AACCTAAATC GGTACTCCTT GGCATAGATA GCAAGGCAGA TTGGATTTAT
ATCGATATTT ATCAAGACAG TAACACCCAA GCGGCCAATC GCTACATCGC CTACGTGCTG
AAAGATGGGC CGTTTCATCT GCGTAAATTG CTGGTACGCA ACTACCACAC TTTTTTAGCC
CGCTTTCCTG GCGTACAAAC CCCAAAAGCC ATCGCTAAAT CCCTTAATAA GGCAACGGCC
AAACGCTTTG CCAGTGGAGA CTCGTTATGA
 
Protein sequence
MSSRKVGTQA ADHAQADKPN SEHKSAPKTA RHRNATTTPE MRHFIQQSEL SVSQLAKILN 
ITEATVRKWR KRESVNDSPN TPHHLNTTLT PMEEYVVVGL RYQLKLPLDR LLKATQTFIN
PNVSRSGLAR CLKRYGVSRL DEFDQELVPK QYFNQLPISQ GSDVQTYTVN SETLAKALAL
PSTDGDTVVQ VVSLTLPPQL TEAEPKSVLL GIDSKADWIY IDIYQDSNTQ AANRYIAYVL
KDGPFHLRKL LVRNYHTFLA RFPGVQTPKA IAKSLNKATA KRFASGDSL