| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2818 |
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| Symbol | dapD |
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| ID | 4479806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3366292 |
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| End bp | 3367116 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727424 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_870451 |
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| Protein GI | 117921259 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCTT TACGCCAACG TATTGAGGCC GCATTTGAAG CGCGTGCCGA CATCACACCA
AGCACTGTTG ACGCAAGCGT GCGTAACGAT GTGCAAAATG TCATCAATAT GCTCGATAAA
GGTGAACTAC GCGTCGCCGA GAAAATCGAT GGCCAATGGC ATGTACATCA ATGGTTGAAG
AAGGCGGTAT TACTGTCATT CCGTATTTTC GATAACGCCG TTATCGATGG TGCCGAAACC
AAATATTTCG ATAAAGTACC GTTAAAGTTC GCCGAATATG ACGAAGCCCG CTTTAAAGCC
GAAGCCATCC GTGTGGTGCC ATCGGCAACC GTACGTAAAG GTTCATTCAT CGGTAAAAAC
ACCGTATTAA TGCCATCTTA TGTAAACCTT GGTGCTTACG TTGACGAAGG CACTATGGTT
GACACTTGGG CAACCGTTGG CTCATGTGCG CAAATCGGTA AGAACGTGCA CTTATCTGGC
GGTGTGGGTA TCGGTGGCGT ACTCGAACCG CTGCAAGCGG GCCCTACCAT TATCGAAGAC
AACTGCTTTA TCGGCGCACG CTCAGAAATC GTTGAAGGCG TCGTGGTTGA AGAAGGCTCG
GTGATTTCCA TGGGCGTTTA TATCGGCCAA AGTACCCGTA TCTATGACCG TGAAACTGGC
GAAATTCACT ACGGTCGTGT ACCAGCTGGC TCAGTCGTAG TATCGGGTAA CCTGCCATCG
GCTTGCGGTA AATACAGCCT ATACGCTGCG ATTATCGTCA AGAAAGTAGA TGCGAAAACC
CGTGGTAAAG TGGGTATCAA CGAACTGTTA CGTATCGTCG ATTAA
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| Protein sequence | MEALRQRIEA AFEARADITP STVDASVRND VQNVINMLDK GELRVAEKID GQWHVHQWLK
KAVLLSFRIF DNAVIDGAET KYFDKVPLKF AEYDEARFKA EAIRVVPSAT VRKGSFIGKN
TVLMPSYVNL GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQAGPTIIED
NCFIGARSEI VEGVVVEEGS VISMGVYIGQ STRIYDRETG EIHYGRVPAG SVVVSGNLPS
ACGKYSLYAA IIVKKVDAKT RGKVGINELL RIVD
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