| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2805 |
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| Symbol | lpxD |
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| ID | 4479792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3350919 |
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| End bp | 3351944 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727411 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_870438 |
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| Protein GI | 117921246 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000424763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTG TGACTTTAAA AGAGCTAAGC CTGTTATTAG ATGGCGTTGT CCAAGGTGAT
GAAACGTTAG TGATCAACAG CGTTGCGACA CTTGAACATG CCCAATCGGG TCAAATCTCT
TTTTTAGCCA ACAGCAAATA CCGTGCTCAG CTTGAGTCAA CTCAAGCGAG CGCGGTGTTA
TTGTCGGCTA AAGACGCGCA GGACTATTCA GGCACTGCGT TAGTCGTTAA AGACCCCTAT
GTGGGGTTTG CCCGTGTGGC ACAGTTTTTA GATACCACGC CCAAGGCGGC CGTGGGTATC
CATCCTTCGG CACAAATCGA CTCTTCTGCC CAGTTAGGCG AAGGCGTAGC GATTGGTGCC
AATGTGGTTA TTGGCGCGAA TGTGATCCTC GGCGAAAACG TGCAGATTGG TGCGGGCTCT
GTGATTGGTC AAGACTCCAT CGTAGGCTCT AACACTCGTC TGTGGGCCAA TGTGACCCTC
TATCATAATG TCCATTTAGG CCAAGATTGT ATTATCCATT CCGGCGCCAT TATTGGCTCC
GACGGTTTCG GTTACGCCAA CGAGCGTGGA CAATGGATTA AAATTCCACA AACTGGTGGT
GTACGTATTG GCGATCGCGT CGAAATCGGT GCGAACTCAA CCATCGACCG TGGGGCTTTA
GGTCATACCG AGATCCACAA CGGTGTGATC ATCGACAACC AAGTACAGGT TGCCCATAAC
GATATTATTG GTGAAAATAC CGCGATCGCT GGCAGCACGA CCATTGCAGG CAGTGTGACT
ATTGGTAAAC ATTGTATTAT TGGTGGTAAC TGCGCGATTG CAGGCCACTT AACCATTGCC
GACGGTGTCC ATCTTTCTGG CGCGACAAAC GTTACAGGTA ACATGCGTGA GCCTGGTTTG
TATTCTTCTG CGACAGTGGC AATGGAAAAC AGAGTGTGGC GTAAAAATAC AGTTCGCTTC
CGTCAATTGG ATGAACTGTT CCAACGTGTG AAAACGTTGG AAAAGAATGC AAATACACCA
GAGTAA
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| Protein sequence | MKSVTLKELS LLLDGVVQGD ETLVINSVAT LEHAQSGQIS FLANSKYRAQ LESTQASAVL
LSAKDAQDYS GTALVVKDPY VGFARVAQFL DTTPKAAVGI HPSAQIDSSA QLGEGVAIGA
NVVIGANVIL GENVQIGAGS VIGQDSIVGS NTRLWANVTL YHNVHLGQDC IIHSGAIIGS
DGFGYANERG QWIKIPQTGG VRIGDRVEIG ANSTIDRGAL GHTEIHNGVI IDNQVQVAHN
DIIGENTAIA GSTTIAGSVT IGKHCIIGGN CAIAGHLTIA DGVHLSGATN VTGNMREPGL
YSSATVAMEN RVWRKNTVRF RQLDELFQRV KTLEKNANTP E
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