Gene Shewana3_2777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2777 
Symbol 
ID4479764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3316071 
End bp3316721 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID639727383 
Productmaleylacetoacetate isomerase 
Protein accessionYP_870410 
Protein GI117921218 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.58778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000623872 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTAT ACGGTTATTG GCGCTCTAGC GCCGCCTATC GTGTGCGTAT TGCCCTCAAT 
CTTAAAGGCG TGAGCGCCGA GCAGTTGTCG GTGCATTTAG TGCGTGATGG TGGCGAGCAG
CATAAGGCGG ATTATATCGC CCTAAATCCG CAGGAGCTGG TGCCGACCTT AGTGGTCGAT
GATGAGCAGG ATGGTGATGC CTTATCCCAA TCCCTCGCCA TTATCGAGTA TTTGGATGAA
CTTTATCCAA AGACGCCGCT GCTGCCTGCA TCGGCGCTTG AACGTGCCCA TGTGCGTGCC
ATGGCGTTAA CCATCGCCTG TGAAATTCAT CCACTCAATA ACCTGCGGGT ATTGCAGTAT
TTAACTCAGA AGCTGAACGT TGACGAAGAA GCCAAAACCG CGTGGTATCA CCATTGGGTG
GCGAGCGGAT TTGCGGCGCT CGAAACTCAA CTTGCGCGCC ATAGTGGCCG TTATTGCTTT
GGTGACAAAG TGACGCTGGC GGATCTGTGC TTAGTACCGC AGGTTTACAA CGCGCAGCGT
TTTAATGTGG ATTTAACGCC GTACCCCAAT ATCATGCGGG TATGGGCTGA GTGTAATCAG
TTGCCGGCCT TTGCGGATGC GGCGCCAGAG CGCCAAGCGG ACGCGGTGTA A
 
Protein sequence
MKLYGYWRSS AAYRVRIALN LKGVSAEQLS VHLVRDGGEQ HKADYIALNP QELVPTLVVD 
DEQDGDALSQ SLAIIEYLDE LYPKTPLLPA SALERAHVRA MALTIACEIH PLNNLRVLQY
LTQKLNVDEE AKTAWYHHWV ASGFAALETQ LARHSGRYCF GDKVTLADLC LVPQVYNAQR
FNVDLTPYPN IMRVWAECNQ LPAFADAAPE RQADAV