Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2774 |
Symbol | |
ID | 4479761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3313409 |
End bp | 3314185 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727380 |
Product | short chain dehydrogenase family protein |
Protein accession | YP_870407 |
Protein GI | 117921215 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.051909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000224975 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAAGCC ACCATTTCGT TGCCGAAAAA TTTATGACCC AAGCAACTGC GATAATTGTG GGCGCTAGCT CACATTTAAG CCGCGAACTT GCCAAACAAT TGGCCGATCA GCAGGTTGAA TTAGCCCTTT TTGCCCAAGA TGTCGAATCA CTCCGCGAAT TTGCCTCGAC CCTGCCCACT AAAGTTCAGG TCTTTTCACT GCAAATTGAA CAGCCAAGCG CCATCATCAA GCAACTCGAA AGCGTTTGGC ACGACTTAGG CGGCGCCCAC TTAGTCTTAG TGAATACCGG ACTCAATAGC TACGATCCTG AGCTGCCATG GCTACCTGAG CAGGACATTA TCAATGTCAA TGTGCGGGGC TTTGCCGCTA TCTGCAATAC GGCATTTAGA TTATTTCGCG AGCAGGGTTA TGGCCAACTT GCCGCCATCA ACTCGATTGC CGGTCTGCGC GGCGGCCCAA GTGTCGCTTA CCATGCCTCT AAAGCCTTTG CGCAAAACTA TTTGGAAGGC TTAAGCATGC ATGCCCAGCG GCTTAAGTTG CCCATTACCA TTACCGACAT CCAACTCGGT TTACTGGATA AGGCCGCCAT GCAGCAAAGT ACGCTATGGC TTGCCCCGCT CCCGCAAGTC GCGGCGCAGA TCATTAAGGC CATGCAGCAG GGTAAACGCC GCGTGTATGT GACCAAGCGT TGGCGCTTAG TGGCTTGGCT AACGAAATTG CTGCCAGAGT TTATCTACAA CACGCGCCAC TGGAAGCCGA AAAAGGCTAA AAAGTAG
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Protein sequence | MISHHFVAEK FMTQATAIIV GASSHLSREL AKQLADQQVE LALFAQDVES LREFASTLPT KVQVFSLQIE QPSAIIKQLE SVWHDLGGAH LVLVNTGLNS YDPELPWLPE QDIINVNVRG FAAICNTAFR LFREQGYGQL AAINSIAGLR GGPSVAYHAS KAFAQNYLEG LSMHAQRLKL PITITDIQLG LLDKAAMQQS TLWLAPLPQV AAQIIKAMQQ GKRRVYVTKR WRLVAWLTKL LPEFIYNTRH WKPKKAKK
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