Gene Shewana3_2774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2774 
Symbol 
ID4479761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3313409 
End bp3314185 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID639727380 
Productshort chain dehydrogenase family protein 
Protein accessionYP_870407 
Protein GI117921215 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.051909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000224975 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAAGCC ACCATTTCGT TGCCGAAAAA TTTATGACCC AAGCAACTGC GATAATTGTG 
GGCGCTAGCT CACATTTAAG CCGCGAACTT GCCAAACAAT TGGCCGATCA GCAGGTTGAA
TTAGCCCTTT TTGCCCAAGA TGTCGAATCA CTCCGCGAAT TTGCCTCGAC CCTGCCCACT
AAAGTTCAGG TCTTTTCACT GCAAATTGAA CAGCCAAGCG CCATCATCAA GCAACTCGAA
AGCGTTTGGC ACGACTTAGG CGGCGCCCAC TTAGTCTTAG TGAATACCGG ACTCAATAGC
TACGATCCTG AGCTGCCATG GCTACCTGAG CAGGACATTA TCAATGTCAA TGTGCGGGGC
TTTGCCGCTA TCTGCAATAC GGCATTTAGA TTATTTCGCG AGCAGGGTTA TGGCCAACTT
GCCGCCATCA ACTCGATTGC CGGTCTGCGC GGCGGCCCAA GTGTCGCTTA CCATGCCTCT
AAAGCCTTTG CGCAAAACTA TTTGGAAGGC TTAAGCATGC ATGCCCAGCG GCTTAAGTTG
CCCATTACCA TTACCGACAT CCAACTCGGT TTACTGGATA AGGCCGCCAT GCAGCAAAGT
ACGCTATGGC TTGCCCCGCT CCCGCAAGTC GCGGCGCAGA TCATTAAGGC CATGCAGCAG
GGTAAACGCC GCGTGTATGT GACCAAGCGT TGGCGCTTAG TGGCTTGGCT AACGAAATTG
CTGCCAGAGT TTATCTACAA CACGCGCCAC TGGAAGCCGA AAAAGGCTAA AAAGTAG
 
Protein sequence
MISHHFVAEK FMTQATAIIV GASSHLSREL AKQLADQQVE LALFAQDVES LREFASTLPT 
KVQVFSLQIE QPSAIIKQLE SVWHDLGGAH LVLVNTGLNS YDPELPWLPE QDIINVNVRG
FAAICNTAFR LFREQGYGQL AAINSIAGLR GGPSVAYHAS KAFAQNYLEG LSMHAQRLKL
PITITDIQLG LLDKAAMQQS TLWLAPLPQV AAQIIKAMQQ GKRRVYVTKR WRLVAWLTKL
LPEFIYNTRH WKPKKAKK