Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2676 |
Symbol | |
ID | 4478443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3198135 |
End bp | 3200087 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727282 |
Product | decaheme cytochrome c |
Protein accession | YP_870309 |
Protein GI | 117921117 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000503474 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0214929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACG TACAAAAATC AAAATTCGCA CTGCTGCTCG CAGCAAGTGC CGTCACTATG GCCTTAACTG GCTGTGGTGG AAGCGATGGT AATGATGGTA AACCCGGTGA GCCAGGTGGC GAGCCAGCTC CCGCTATTCA AAAACTCAAT TTTACCTTTA ACAAATCAGT AGTGACTAAC GGTGTTCCTA GTGTTGAATT CACCGTCACC AACGAAGACG ATTTGCCCGT AGTTGGCCTG CAAAAAATGC GCTTTGCTGC TGCTCAGCTG ATTCCTCAAG GTGCAACAGG TGCTGGTAAT GCCTCTCAAT GGCAATACTT TGGTGATGAA ACCTGCGATG TGGCATCAAC CTGTCCTGGT ACCTTCGTGG ACATGAAGAA CGGCCACTAC AGCTACACCT TCAAGATGAA TCTCACTGCC AACGCTAAGA TCACCTATAA CGACCAACTG GCGCAACGTG TTCTGATCCG CGCTTACAAC ACGCCATTAC CAGACGGCAC ACAAGTCCCT AACAGCAACG CTTATGTTGA TTTTACCGCT GACACTGGTG CAACACCGGG TTACAGCCGT AAAGTCGTCG CCACAGAAAG CTGTAATGCT TGTCACCAAG ACTTAGCCAA TGTGAAACAC GGCGGCGCTT ACTCAGATGT TAACTACTGC GCGACTTGCC ATACTTCTGG CAAAGTGGGT GTAGGTAAAG AATTTAACGT GTTAGTCCAC GCTAAACATA AAGACCTCAC CTTAGGTTCG TTAGAAAGCT GCCAAAGCTG TCACGTTGAA ACCGAAGCCG CACCTGATTG GGGCAACTGG TCACGTATCC CAACTGCCGC CACCTGTGGC AGCTGCCATA CAGCCGTTGA TTTTGCCGCA GGCAAAGGCC ACTCTCAGCA GTTAGATAAC TCTAACTGTA TCGCTTGTCA CAACAGCAAT TGGACTGCCG AGTTACACAC AGGCAAAACC GCTGAGAAGA AAGCGGTTAT GGCTCAGTTA GGTATGTCTG CCACACTCGC GGGTCAAGAA GACAATACTG CGGTATTAAC CGTATCTATC TTAGATAAAG ACGGTAATGC CATCGATGCA GCAAGCGTAC AAGATAAGAT CAAACGTTTA GAAACGATCA CTAACGTCGG TCCTAACTTC CCGATCATGG GCTACAACAA GAGCCCAGGT AGCGGTGCTG CTAAGATAGC CAAAGACCTC GTTAAAGATG GTGCACTGCA AGATGGTGTG ACCTTAGTTG ACGGTAAACT GGTATTCACC ACTCCTGCAC TGCCATTTGG TGCTGGCGAT ACTGATACCG CCTTTACCTT TATCGGTCTA GAAATGTGTA ACACTGGCAC CACGCTGACA GCTTGTACTG CAGATAGCAC AACCACCAGC ATGAAAGCCG ACTTAGTCTT CGGTACTAAA TCAGGCAATG CACCCAGCAT GCGCCATGTG AACTCAGTGA ACTTCAGCAC TTGTCAAAAC TGTCACAGTG ATACCTTCGA GCTACACAAA GGTCACCACT CAGGCTTTGT GATGACAGAA CAAGTTTCAC ATGCCAAAGA CGCAAGCGGT AAACCAATCG TCGGTGTGGA TGCCTGTGTG GCCTGTCATA CCCCAGATGG TACCTATGCT AGCGGTGCAA ACAAAGGTGG TTTCGAAATG AAACTGCACG TAGTTCACGG TGAGCAAGGC GTTATCAAAG AATGTACTCA GTGCCACAAC GACTTCAACT TAGACGCGTT CAAAGTGAAG GGTGCACTGG CCACTTCTGC TGGTAAATAC ACCACGCCAA TCACAGCAAC TTGTACTTCA TGCCACGCGC CAGAATCTAT TGGCCACGGC TTAGAAAATA TGGGCGCGAT TGTGAACGGT GATTATGTTC AAGCCAACCA AGCGGCACAG TCAGAAACCT GTTTCTACTG CCATACCCCA ACAGTTGCAG ATCACACTCA AGTGAAAATG TAA
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Protein sequence | MMNVQKSKFA LLLAASAVTM ALTGCGGSDG NDGKPGEPGG EPAPAIQKLN FTFNKSVVTN GVPSVEFTVT NEDDLPVVGL QKMRFAAAQL IPQGATGAGN ASQWQYFGDE TCDVASTCPG TFVDMKNGHY SYTFKMNLTA NAKITYNDQL AQRVLIRAYN TPLPDGTQVP NSNAYVDFTA DTGATPGYSR KVVATESCNA CHQDLANVKH GGAYSDVNYC ATCHTSGKVG VGKEFNVLVH AKHKDLTLGS LESCQSCHVE TEAAPDWGNW SRIPTAATCG SCHTAVDFAA GKGHSQQLDN SNCIACHNSN WTAELHTGKT AEKKAVMAQL GMSATLAGQE DNTAVLTVSI LDKDGNAIDA ASVQDKIKRL ETITNVGPNF PIMGYNKSPG SGAAKIAKDL VKDGALQDGV TLVDGKLVFT TPALPFGAGD TDTAFTFIGL EMCNTGTTLT ACTADSTTTS MKADLVFGTK SGNAPSMRHV NSVNFSTCQN CHSDTFELHK GHHSGFVMTE QVSHAKDASG KPIVGVDACV ACHTPDGTYA SGANKGGFEM KLHVVHGEQG VIKECTQCHN DFNLDAFKVK GALATSAGKY TTPITATCTS CHAPESIGHG LENMGAIVNG DYVQANQAAQ SETCFYCHTP TVADHTQVKM
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