| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2675 |
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| Symbol | |
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| ID | 4478442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3195628 |
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| End bp | 3197802 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639727281 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_870308 |
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| Protein GI | 117921116 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000733685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0455406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC GGTTCAATTT CAATACCGCA ACAAAAGCGA TGTTGGGTGC CGGTTTACTT
TCACTTCTTC TCACTGGTTG CGGTGGCAGT GACGGTAAAG ATGGTGAAGA CGGTAAACCA
GGCGTTGTTG GTGTTAATAT CGACTCAACC TCAACGTTAA AAGCGAAATT CACAAATGCC
ACTGTTGATG CTGGCAAAGT CACCGTTGAT TTTACATTGG AAAATGCCAA TGGTGTGGCC
GTACTCGGCT TAACGAAAGA TCACGATTTA CGATTCGGTA TTGCTCAGCT CACCCATGTG
ACTGAAGCAA CGGACGATCC AGCTAAACCA GCGGATCGTG GCTATCAATG GCAAGCCTAT
ATCAATGCCA AAAAAGAGCC AGGCACTGTT CCATCAGGTG TAGATAACCT TAATCCATCG
GCCCAGTTCC AAGCCAACGT TGAAGCGGCA AATAAATGCG ACACTTGCTT AGTTGACCAC
GGTGACGGTA GTTATAGCTA CACCTATCAG GCCAATATTG CCAATGTAAC TGAGCCACTC
ACCGTCACTT ACAGTGCCGA CGCGACTCAA CGCGCCACAA TGGAACTTGA TTTACCACAG
GTTGTGGCCA ACGCCCATTT TGATTGGCAA CCCTCTACAG GCAAGACTGA AGGCATTCAA
ACCCGCAATG TGGTTTCTAT TCAAGCCTGT TACACCTGTC ACCAACCAGA AAGCTTAGAG
CTGCATGGTG GCCGTCGTAT TGATCTTGAA AACTGTGCCT CTTGCCATAC TGCAACTTCT
GGCGACCCAG AATCAGGCAA TAGCATTGAA TTCACTTACA TGATCCACGC TATCCACAAA
GGTGGTGAGC GTCATACCTT CGATGAGACA GGCGCAGAAG TTCCAGCACC TTACAAGATT
GTTGGTTACG GTGGTTCATT ACACGACTAC GGCAAAGTAG GCTTCCCATT GAAACCTGCC
GCGGACTGTT CTGCATGTCA CGTTGAAGGT GCGGGCGCGC CTGCGAATGC AGACCTCTTC
AAAGCCGATT TAAGCAATCA AGCTTGTATT GCTTGTCACA CCGAAAAACC ATCTTCACAC
CACAGCAGCA CAGATTGTAC GTCTTGCCAC AATGCTACTG AGCCTTACGG CGGTACTGGC
AGCGCGGCCA AACGCCATGG TGATGTACTG AAAGCCTATT CTGATACTCA AGCAATGGGC
ATCAAGTTCA GCAATGTGGG TGTGAATGAT ACAGGTAAGA TTACCTTTGA TGTTCAAGTG
GTTGATAAAG ATGGCAACGC TATCGATAAA GCACTTGTAA ACCAAGGCTC ACGCGTTGTA
GTGGCATGGG ATTCTGATAA AGATTACCCA AGCTATGCTG ACGCCTCTTA CAGCAACCGT
CGTATCGCAC TTAGCGAAGG CACTTACAAC GAAGCGACCA AAACCTATAC ATTAACTGGC
ACTAAGTTCA ACCTGCCAGC GGATGCTAAC GGTAAAACCT TTGAACTCTG GTCTACATTA
GAAGTGTGTT TCAACAGCGG TGGTTACGGT GTTGCCGAAA TCGTTCCAAC CGATTGTAGT
CTGGCGAACG TGCGCAAAGT GCCCGTGAAA GAAGCCCCTT ACCACTTCGT TTGGAAAGAC
ACAGGTGTAG ATAGCGCTGC AACCGCTAAA ACACGTCGTG AAATCATCGA TCCAACTAAG
TGTCAAGGCT GTCACAATCA GGAAATCCAC CACTATGACA ACGGCGTAAA CTGCCAAACT
TGTCATACAT CGGATAAGAC CTTGAAGAAT GATGCAGCCT ATCCAGGCGG CAAGATCCCA
ACCAGCTTTG CTTGGAAAGC CCACGAACGT GAAGGCCATT ACCTCAAGTA TGCGGGCGTT
CAATCAGGTA CTGTACTCAA GACCGATTGC TCAACCTGTC ACACTGATAA AGGTATCACC
CTAGGACGTG CTCCTGAGCG TGTATGGCGC TATGGCGATA TCACCAATAG TGGCGCGGAT
ATTTGGGTAT CTTCAGATGC GGGTGCATGT TTAAGCTGTC ACCAAAAGTA TCTGTCTGAT
GCAACTAAGT CTCACATTGA AGCTAACGGC GGTATCTTAA ATGGTACCAG TGCAGCGGAT
GTTCAAACCC GTGCGTCTGA AAGCTGTGCA ACTTGCCATA CTCCAACTCA GTTACGCGAA
GCACACGGTA ACTAA
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| Protein sequence | MMKRFNFNTA TKAMLGAGLL SLLLTGCGGS DGKDGEDGKP GVVGVNIDST STLKAKFTNA
TVDAGKVTVD FTLENANGVA VLGLTKDHDL RFGIAQLTHV TEATDDPAKP ADRGYQWQAY
INAKKEPGTV PSGVDNLNPS AQFQANVEAA NKCDTCLVDH GDGSYSYTYQ ANIANVTEPL
TVTYSADATQ RATMELDLPQ VVANAHFDWQ PSTGKTEGIQ TRNVVSIQAC YTCHQPESLE
LHGGRRIDLE NCASCHTATS GDPESGNSIE FTYMIHAIHK GGERHTFDET GAEVPAPYKI
VGYGGSLHDY GKVGFPLKPA ADCSACHVEG AGAPANADLF KADLSNQACI ACHTEKPSSH
HSSTDCTSCH NATEPYGGTG SAAKRHGDVL KAYSDTQAMG IKFSNVGVND TGKITFDVQV
VDKDGNAIDK ALVNQGSRVV VAWDSDKDYP SYADASYSNR RIALSEGTYN EATKTYTLTG
TKFNLPADAN GKTFELWSTL EVCFNSGGYG VAEIVPTDCS LANVRKVPVK EAPYHFVWKD
TGVDSAATAK TRREIIDPTK CQGCHNQEIH HYDNGVNCQT CHTSDKTLKN DAAYPGGKIP
TSFAWKAHER EGHYLKYAGV QSGTVLKTDC STCHTDKGIT LGRAPERVWR YGDITNSGAD
IWVSSDAGAC LSCHQKYLSD ATKSHIEANG GILNGTSAAD VQTRASESCA TCHTPTQLRE
AHGN
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