Gene Shewana3_2665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2665 
Symbol 
ID4478432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3182318 
End bp3182809 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID639727271 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_870298 
Protein GI117921106 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000151869 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.18254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAT TACACACTAA TTTTGGCGAC ATTAAACTGC AACTGAACGC CGAAAAAGCA 
CCGCTGACTG TGGCAAACTT TATGAAATAT GTTGACGAAG GTTTCTTCGA CGGCACCATT
TTCCACCGTG TAATTGACGG CTTTATGATC CAAGGCGGTG GCTTTACCGC TGAAATGAGC
CAAAAACGTT GCCATGAGCC AGTGAAAAAC GAAGCCAACA ACGGTTTATC AAACCGTACT
GGTACTATCG CGATGGCGCG TACTTCTGAT CCACACTCAG CGACGGCTCA GTTCTTCATC
AACGTCAACG ATAACACCTT CCTCGATTTC AAATCTGAAA GCATGCAAGG TTGGGGTTAC
TGCGTATTTG GTGAAGTGGT TGAAGGCATG GACATCGTTG AAAAAATCAA AGCTGTCAGC
ACTGGTAACC GTGGCATGCA CCAAGATGTG CCATTAGAAG CGGTTGTGAT TGAAAAAGTC
AGTGCGGCCT AA
 
Protein sequence
MITLHTNFGD IKLQLNAEKA PLTVANFMKY VDEGFFDGTI FHRVIDGFMI QGGGFTAEMS 
QKRCHEPVKN EANNGLSNRT GTIAMARTSD PHSATAQFFI NVNDNTFLDF KSESMQGWGY
CVFGEVVEGM DIVEKIKAVS TGNRGMHQDV PLEAVVIEKV SAA