Gene Shewana3_2664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2664 
SymbolcysS 
ID4478431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3180798 
End bp3182183 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content49% 
IMG OID639727270 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_870297 
Protein GI117921105 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.06523e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.136129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGT TGAAGATTTA CAACAGTATT ACCCGTCAAA AACAGGAATT TAAGCCAATT 
ACTCCCGGAA AAGTTGGGAT GTATGTATGC GGGGTGACCG TATACGATCT GTGTCATATT
GGCCATGGGC GTACTTTTGT TTCCTTCGAT ATGATCGTTC GCTACCTGCG TTATGCGGGT
TATGAAGTGA ATTTTCAACG TAACATTACC GATATTGATG ACAAAATCAT CAAACGCGCC
AACGAAAATC AAGAAGATTG CAATACATTA ACCGATCGCT TGATTGGTGA AATGCACAAG
GATTTCGATG CGCTGAATAT GATCCGTCCC GATTTCGAGC CACGTGCCAC TCTGCACATT
GCCGAAATCA TCGATATGGT TGAGCGTTTA CTGGCCCGTG GTCATGCCTA TGTGGCTGCC
GATGGCGATG TGCTGTTCAG TGTGGCCTCT TTCCCTGAAT ACGGCCGCCT ATCAGGCCAG
AACCTGGAGC AATTACAGGC GGGTGCACGG GTTGAGGTTG ACGATAACAA GCAAAATCCA
ATGGATTTCG TGCTGTGGAA AATGTCTAAA CCGGGCGAGC CAACATGGGA ATCACCATGG
GGGCCGGGTC GTCCAGGCTG GCATATCGAA TGTTCGGCAA TGAACAGCAA GCACTTAGGT
CTGCATTTCG ATATTCACGG TGGCGGTTCA GATTTACAAT TCCCGCACCA TGAGAACGAA
ATTGCTCAGT CTTGCTGCGC CCATGATACG CCATACGTGA ATTACTGGAT GCACACTGGC
ATGGTGATGG TTGACCGTGA GAAGATGTCA AAGTCTTTAG GTAACTTCTT CACCATTCGT
GATGTATTAG GCCATTACGA CGCTGAAACC GTGCGTTACT TCCTGCTATC GGGTCACTAT
CGTAGCCAAA TCAACTACTC AGAAGAAAAC CTCAAGCAGG CACGTGCCGC CTTAGAGCGT
TTATACACTG CGATTAAAGA TGTTGACCTG ACTGTTACAG CAGCACCTGC GGAAGAGTTT
GTCGCTAAGT TTAAAGCGGC CATGGACGAT GACTTTAATA CGCCAGAAGC TTACTCAGTG
CTGTTTGATA TGGTACGTGA GATCAACCGC TTGAAAACCA CCGATATGGC GCAGGCGTCA
GCTATGGCTG TTGCCATGAA GCAACTGGCC GATGTGTTGG GATTATTGCA CCAAGCGCCC
GATGCCTTCT TTAAAGGTGA GGGGAGCGAT GATGAAGTGG CAGAGATTGA AGCGCTGATC
GTTGAGCGTA ATCGTGCCCG CGCCGAGAAA GATTGGCCTG CGGCTGATGT TGCGCGTAAT
CGGTTAAATG AGCTTGGCGT AGTCTTAGAA GATGGTCCAA GCGGTACCAC TTGGCGCAAG
AAATAG
 
Protein sequence
MPMLKIYNSI TRQKQEFKPI TPGKVGMYVC GVTVYDLCHI GHGRTFVSFD MIVRYLRYAG 
YEVNFQRNIT DIDDKIIKRA NENQEDCNTL TDRLIGEMHK DFDALNMIRP DFEPRATLHI
AEIIDMVERL LARGHAYVAA DGDVLFSVAS FPEYGRLSGQ NLEQLQAGAR VEVDDNKQNP
MDFVLWKMSK PGEPTWESPW GPGRPGWHIE CSAMNSKHLG LHFDIHGGGS DLQFPHHENE
IAQSCCAHDT PYVNYWMHTG MVMVDREKMS KSLGNFFTIR DVLGHYDAET VRYFLLSGHY
RSQINYSEEN LKQARAALER LYTAIKDVDL TVTAAPAEEF VAKFKAAMDD DFNTPEAYSV
LFDMVREINR LKTTDMAQAS AMAVAMKQLA DVLGLLHQAP DAFFKGEGSD DEVAEIEALI
VERNRARAEK DWPAADVARN RLNELGVVLE DGPSGTTWRK K