Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2629 |
Symbol | |
ID | 4478497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3136302 |
End bp | 3138734 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727232 |
Product | DNA polymerase II |
Protein accession | YP_870262 |
Protein GI | 117921070 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0639534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000529366 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAATCCCC CCGAGAGTCT GACGCATGAC ACGGCTGCGC CTGTGAGTGT ACAGGGACGC GTCCTCACGC GCCATGCTAT TACACGCGGT GCAACGCTTG TGTTGCAGTA TTATCTCGCC ACCGTTTCAG GCCCTGTGCT GGTGGAGTTA CCAGACTCTG AGTACATTTG TTTTTGTCAT CAAAGCGATA TGGCGGCATT GCAGTTACAA ACGCCGGGGC TGGCGCTGCG CTTTGTGCCG CTTACACTTA AAAGCTTTAA AAGACAAAGC GTGGCGGCGA TTTATGCTCC ATCGAGTAGT GTGTTTCGTC ACTTACAGCG GATAGCGACA GATGCGGGGA TCCCCTTATT TGAGGCGGAT ATCCGTCCCG AGCAGCGCTT TTTAATCGAG CGCTTTGTGG CGCTCGATGT GGCATTTTTA GGGCATTTTG TCGGCAAAGC AGGCATAGAT GGACAGTTGT CTGTTTTTAG CGCCATCCGC GCCAAAGCGG TTGCGCCGCA GTCTGCAATT AAACTGCGCT CTATCTCCCT CGATTTTGAA TGCAGTTTTG ACGGTTTACT CTATTCCGTG GCCCTTTATG GACGCGATGC GCAATCTCAG CCCTATGAAA AAGTCATTAT GGTGGGCGAG GCGCAGCCAG ATGCTGCAAT CTATATCGAA TGGGTGAACG ATGAGGCCGC ACTTATCCAT CGTCTCATCA CCTGGTTTAC AGAGTTTGAT CCCGATGTGA TCATTGGTTG GTCGGTGGTG ACCTTTGACT TGGCCCTGCT ATATCGACGT GCGTTACTGC ACCGGATCCC GCTGCGTATT GGTCGAGGTG GCGCGCTCCT TGAGTGGAAA GTTGAGAATA AATTTCGGCC AGAAACCTTA AGTTTGCCAG GGCGTGTGGT GCTCGATGGT ATCGATTGGT TAAAGGCGGC CTTTTATCAA TTCGAGCGTT TCTCCTTGGA GTTTGTCGCT CAAGCGTTGC TGGGCGAAGG CAAAGCGATT CATGATGTAG AAAATCGAGC GCAAGAGATT GATTCGTTAT TTGCCGAAAA TAAACAAGGG CTTGCTCACT ATAACCTGAC TGATAGTCGC TTAGTGTGGG ATATTTTTGA ACATACGCAA TTGTGGGATT TTGCCCTCGC TCGCGCCGAG TTAACGGGGT TAGAACTGGG GCGCGTAGGC GCCTCGGTCG CCGCATTCAA CCACTTGTAT CTACCGCATT TACATAGAGC GGGTTTCGTC GCGCCCGCTG AGCCTGCCAG TCAAGGGATT GAAAGCCCAG GCGGTTATGT TATGGATTCT GTCCCTGGTT TTTATCAGCA TATTTTAGTA TTTGACTTTA AAAGCCTTTA TCCATCGATT ATCCGAACTT TTTTGATTGA TCCTAAGGGG TTGATTGAAG GTTTAGATAA TGAGGACGGA TCTGCATTAG ATGAGCCTGA AACTGTTCCG GGTTTTTTGG GCGCGCGTTT TAATCGGCAT CAACCTATTC TGCCCAAACT CATCCAAAAT CTCTCAGAGC AACGTGAGAA AGCTAAGCGG GAGGCGAATG CGCCTTTATC GCAAGCGATT AAAATCATTA TGAATTCGCT ATATGGGGTT TTAGGCTCCC AAGGCTGTGT GTTCCACGAT GCGAAACTGG CAAGCTCCAT CACCATGCGC GGTCATCAAA TTATGAAACA AACCCGCGCG TGGATTGAGG AGATGGGCTA CCAAGTCATT TATGGGGATA CGGACTCCAC CTTCGTCTAT TTAGGCCCAG AACCCGATCT CAGTGATATT AATGCCTTAG GTAAGCAGAT TGCCGCGCGA ATGAATCAGC AATGGCAAAG TAAAATTGCG CAGGAGTTTC AGCTAGAAAG TTTTCTCGAG CTGCAATTTG AGCGCCACTA CGAACAGTTT TTTATGCCGA CCCTGCGGGG CTCGGAGGAG GGGAGTAAGA AGCGCTATGT TGGAGCATGG CGTAACAATA GCGGAGCGTT AGAAATCACT TTTAAGGGAA TGGAGCAGGT TCGTAGCGAT TGGAGCCCCT TAGCCCGCAA GGTGCAGGCT GAACTCTATG AGCGCATGTT TAACCAACGG GATATTAGTG GTTATTTGGC TGATGTTATC GGCGAACTTC AAGCGGGAAA GCGCGATGAT GAGTTAGTGT TTAGTAAACG TATGCGCCGT AATTTAGATG AATACACGGC TAAGTCTTCT CCCCATGTGA AAGTCGCGCG CCAGCTTTGT GAGTTAACAG GAAAGTCATC CTTTGGCAAG CGAGGGGCGC AGATTGATTA TGTAATTACT GTAAACGGTC CTGAACCCGT TTCGCATAGA TCGTCTACAA TTGATTATCA GTACTACATT GATAAGCAAA TTGGCCCTAT TGCAGAGCCT GTTTTTTCAA TAATGAAACT AAATTACACT AGCATTACGT CGAATCAGCT GTTGTTAATT TAG
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Protein sequence | MNPPESLTHD TAAPVSVQGR VLTRHAITRG ATLVLQYYLA TVSGPVLVEL PDSEYICFCH QSDMAALQLQ TPGLALRFVP LTLKSFKRQS VAAIYAPSSS VFRHLQRIAT DAGIPLFEAD IRPEQRFLIE RFVALDVAFL GHFVGKAGID GQLSVFSAIR AKAVAPQSAI KLRSISLDFE CSFDGLLYSV ALYGRDAQSQ PYEKVIMVGE AQPDAAIYIE WVNDEAALIH RLITWFTEFD PDVIIGWSVV TFDLALLYRR ALLHRIPLRI GRGGALLEWK VENKFRPETL SLPGRVVLDG IDWLKAAFYQ FERFSLEFVA QALLGEGKAI HDVENRAQEI DSLFAENKQG LAHYNLTDSR LVWDIFEHTQ LWDFALARAE LTGLELGRVG ASVAAFNHLY LPHLHRAGFV APAEPASQGI ESPGGYVMDS VPGFYQHILV FDFKSLYPSI IRTFLIDPKG LIEGLDNEDG SALDEPETVP GFLGARFNRH QPILPKLIQN LSEQREKAKR EANAPLSQAI KIIMNSLYGV LGSQGCVFHD AKLASSITMR GHQIMKQTRA WIEEMGYQVI YGDTDSTFVY LGPEPDLSDI NALGKQIAAR MNQQWQSKIA QEFQLESFLE LQFERHYEQF FMPTLRGSEE GSKKRYVGAW RNNSGALEIT FKGMEQVRSD WSPLARKVQA ELYERMFNQR DISGYLADVI GELQAGKRDD ELVFSKRMRR NLDEYTAKSS PHVKVARQLC ELTGKSSFGK RGAQIDYVIT VNGPEPVSHR SSTIDYQYYI DKQIGPIAEP VFSIMKLNYT SITSNQLLLI
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