| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2627 |
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| Symbol | |
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| ID | 4478495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3131779 |
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| End bp | 3134592 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639727230 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_870260 |
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| Protein GI | 117921068 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000622883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000020018 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATAAGA ATAACTTTTT AGCCAAGTCT GTGCGTTTCG CATTGATTGG TGGTGTGGCT
GCAACAGCCC TAAACGTGCC ATTGGTAGTG GCTGCTGATG AAGCTAGCGC CGAGAAAGTA
GAACGTATTG AAGTAACTGG TTCACGTATT AAACGCACTG ATATGGAAGC TGCAAGCCCT
GTATTGGTAA TGAACCGTGA TGAAATCGCT GCAACAGGCC TAGTGAGCTT AGGTGATATT
TTACAAACTA TTCCTTCTGC AGGTGCAGCA CTTAATACCG CGTTTAACAA CGGCGGTAAC
GGTTCTACTA ACATGGACCT GCGTAATCTA GGTGCTCAAC GTCTGTTGGT TTTAGTGAAT
GGTCGCCGTT GGATTTCATC TCTAGGTTCA ACCGTAGATA TGAATACAAT TCCAACAGCG
GCTGTAGAAC GTATTGAAGT TTTGAAAGAC GGTGCTTCAG CGGTATACGG TTCAGATGCT
ATAGCTGGTG TGGTTAACAT CATTACTCGA AAAGATTTCG AAGGCGTTGA AGTTTCAGTT
TATGGTGGTG AAAACTTAAG TGAAGGCGAC GGTCGTCAAT ATACAGCTGA CCTTACTTTT
GGTGTCTCTG GTGAAAAAGG TGGCTTGTTA TTTAACATGA GCCATGTAAC TCAACAGCCA
ATTTGGGCTG GCGACCGCGA TATATCTTCA GTTGGTACTA GTAGTACTAC GGAAAATACT
CGTTTGAGAG TTGATCCCAC GACTTTAAAT CAAGCAAACC AAGATGCTTT AGCGGCTGCT
GGCTACACGA TTAGAAGCAA CGGATTGTAT GATCTTATGT CTTTACCTGG TACAGGTGCT
GATGTTGGCT TAGATAAGTT CCGTAACCGT GCGGGAGATG TTTATAACTA TGCTCCTGAT
AACTATCTGG TAACACCTCA AAATCGTAAC GCATTTTATG TTCAAGGTTA TTACGACCTT
GCTGATAATT TACGTTTAGT GAGTGACTTT ATGATGACAA ACCGTAAGTC ATCTCAAGAA
CTTGCACCAA TGCCTGTTAC GCTAGGTGCA TCTTTTGGTG CTGCAGCTAG CCGCGTAGAT
ATACATGCTG ATAATATTTA CAATCCGTTT GGTGAAACTT TATATGGTGA CAGTGCTAGA
GCTGTTGCAA ACGGAGTTGT AAGCGATCCT TTAGATTACA CTCCATATGC TCTACAACGT
CGTATGTTAG AGGCTGGACC ACGTCGCTAT GAACAAAACG ATATGACTTA TCGTGCGATG
GTTGGTCTAG AGGGAAACAT AACTGATAGT TGGAGTTGGA GTGCACATTA TATTTACGGT
CAAAACAGCC AAGATGAGTT AACAACTGGC TTATTAAATT TAACCCGTAT TAACCAAGCT
CTCGGTGCTA ATTGTAACGC AAGCACTGCT TGTACACCTT TAAACCTTTT TGGTGGTCCA
GGAAGCATCA CCAACGACAT GATTGATTAC ATTACTTTCG ATTCAGTTGG TCGTTCCGGT
CTGACGATGA AAGATTATGC ATTCAACATT TCAGGTGATC TTTTCGACTT ACCAGCTGGT
AGCTTAGGTG TCGCAATTGG TTTAGAGCGT CGTGAAGAGA CTGGTTATGA TACACCAGAC
CCATTAACTG TAACTGGAGA GTCTTCTGGT AACCAACGTG ACGCAACTGC TGGTGGTTTC
AGATTAGATG AGGCATATGT TGAACTCTCA ATCCCTGTGC TAGAAAGTTT AACTATCACG
CCTGCAACGC GTTTCTCAGA CCATGATGTA TATGGTAATA ACACTAGTTC AAAAGTGGGT
GCAGAGTTCC GCCCTATGGA TGACTTGTTA TTACGTGCAA CCTGGGCTGA GGGATATCGT
GCTCCTTCTA TTTCGGATCT ATATGCAGGT AATGCGGATT CATACCCAAG CTGGACTGAC
CCTTGTAATA CTCGTGATGA TGAAGGTAAT GTATTAGATA TTTCTGGTAA ACCTGGATGT
TCTGCTGTAC CAGATGGGTA TCGTCAAGCG AATACGCAGA TCCGTATTAC ACAAGTATCT
TCTCCAGATT TAAAACCAGA AACGTCTGAA TCTGTAACTG CTGGTTTTGT ATATAACCCA
TCTTGGTTAG AAGGAGCTGA GTTAACTTTA GATTATTATA ACATTAAAGT TAAAGATGCA
ATTGGTCGCT ATGGATACAC TCGTATCGCA ACAGAATGTG CTGAAGGTAC GAATCCATCA
TCTTGTAATG CCATTGACCG CGATCCATTA GGTAACATCG TTGATTTACG CAATTATTTA
TTAAATGCAA ACAACTATGA TGTTAGTGGT ATCGACATGT ATACTGGCTA CCGTTTTGAA
ACAGGTTTTG GAAGTTTTAA AACCTCTCTT GACATGGCCT ATGTCATCGA GAACAACTTT
AACGGTTATG ATCAAGTCGG GCAGCAATAT GGCGATGGTG GTTATCCTCG CATTAAAGCA
AACTTCTATA TTGATTGGGC TATGGGAGAT TGGGATGCCC ATTGGAAAAC CCGTTATGTA
CACAGCATGA TGAGCAATTA CTATGTTGAT GGTGTGTATG ACTATTACGG TATACCTGAA
AGCGATTATA CCAAAGAGTT TGATGCTTAT ATGGTGCACA ATATTTCTGT CGGATATTCA
TTTGCTGAAT ATAATACTAA CGTAAGTTTA GGTATTAATA ACTTATTTGC GGAGAAACCC
GAATCAGAAT ACATCAACAA TGACTTAGCT ATGTCTACAA ACAACTTCTC TGTAACTGAG
TATGATGTAA ACATGGATCG CTTTGTTTAC TTACGTGCAA CTGTGAAGTT TTAA
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| Protein sequence | MHKNNFLAKS VRFALIGGVA ATALNVPLVV AADEASAEKV ERIEVTGSRI KRTDMEAASP
VLVMNRDEIA ATGLVSLGDI LQTIPSAGAA LNTAFNNGGN GSTNMDLRNL GAQRLLVLVN
GRRWISSLGS TVDMNTIPTA AVERIEVLKD GASAVYGSDA IAGVVNIITR KDFEGVEVSV
YGGENLSEGD GRQYTADLTF GVSGEKGGLL FNMSHVTQQP IWAGDRDISS VGTSSTTENT
RLRVDPTTLN QANQDALAAA GYTIRSNGLY DLMSLPGTGA DVGLDKFRNR AGDVYNYAPD
NYLVTPQNRN AFYVQGYYDL ADNLRLVSDF MMTNRKSSQE LAPMPVTLGA SFGAAASRVD
IHADNIYNPF GETLYGDSAR AVANGVVSDP LDYTPYALQR RMLEAGPRRY EQNDMTYRAM
VGLEGNITDS WSWSAHYIYG QNSQDELTTG LLNLTRINQA LGANCNASTA CTPLNLFGGP
GSITNDMIDY ITFDSVGRSG LTMKDYAFNI SGDLFDLPAG SLGVAIGLER REETGYDTPD
PLTVTGESSG NQRDATAGGF RLDEAYVELS IPVLESLTIT PATRFSDHDV YGNNTSSKVG
AEFRPMDDLL LRATWAEGYR APSISDLYAG NADSYPSWTD PCNTRDDEGN VLDISGKPGC
SAVPDGYRQA NTQIRITQVS SPDLKPETSE SVTAGFVYNP SWLEGAELTL DYYNIKVKDA
IGRYGYTRIA TECAEGTNPS SCNAIDRDPL GNIVDLRNYL LNANNYDVSG IDMYTGYRFE
TGFGSFKTSL DMAYVIENNF NGYDQVGQQY GDGGYPRIKA NFYIDWAMGD WDAHWKTRYV
HSMMSNYYVD GVYDYYGIPE SDYTKEFDAY MVHNISVGYS FAEYNTNVSL GINNLFAEKP
ESEYINNDLA MSTNNFSVTE YDVNMDRFVY LRATVKF
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