| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2611 |
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| Symbol | |
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| ID | 4478479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3115569 |
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| End bp | 3118625 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639727214 |
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| Product | exonuclease SbcC, putative |
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| Protein accession | YP_870244 |
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| Protein GI | 117921052 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.153819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000100584 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCCAC TCACGCTGTC AATGTCGGCC TTTGGCCCCT TTGCCTCGAC TCAAACCATT
GATTTTACCG AACTGGGGGA TAACCCCTTA TTCCTGATCA ACGGGCCAAC TGGTGCGGGC
AAGACTACAT TGCTCGACGG AATTTGTTTT GCGCTCTACG GCAAAACCAC TGGTAACGAG
CGCGAAGGCA GTCAGATGCG CTGCGATATG GCCGATGATA ACTTGCTTAC CGAGGTGACT
TTTAGTTTTC AATTAGGCAG TACGAGTTAT CGTATTCGCC GCGTCCCCGA GCAGGAAAGA
TTAAAGAAAA GCGGTGATGG CTCAACGGTA CAAAAGAGTG AGGCGCAGCT GTATAAGATT
GCCCCAGATG GCAGTGAAAC CCTTATCGTC GCCAGTAAAG TGTCAGACGC CACGGCCGAA
ATCGAGGCAT TAACCGGCTT AGATGTGGAG CAGTTCCGTC AAGTAATGGT GCTCCCGCAG
GGGAAATTTC GCGAATTGCT GATGGCCGAC TCTAAGGCGC GTGAGCAAAT TTTTAGCCAG
CTATTTCAAA CTCATATTTA TAAACGCATC GAAGATACCC TAAAAGCCAA GGCGGCGGAT
ATTCGCAACC TTGTCAAAGA ACAGCGCGCC CGCCGCGACG GTATTTTGCA AACCGCAGCA
TTAACATCCG ATGACGAACT TGCCGCAGAG TTTAGCCGCA TTGAACCCGA ATTCGCGGCG
GCGACGGCGG CAAAGGAGCA GAGCGTTGCG GCGCATTTAG CGGCATTAAA ACAGCGTGAT
AGCGCGCAGC AACTCTTTGC TGAATTTACT CGCTTACAGG AATTGCAGGC TGAGGCGCTT
AGCCTTAATG AGCAGCAAGC GCAGATTGCA ACCCAAACGG CGCGGCTTGA CGTCGCCAAG
CAAGCAATAC GGGTAAAACC CTTATTAGAT AATGTCTTGT CGCGGGAGCA AGAAGCGAGT
CTCGCCGCCG CTCAGCGCGA TAGTGTGCAG TCGACACACG ATGCCGCTAA GATCGCACTC
GCACAAGCTG AAACAGCGGC CCAGGAAATC ATTCCCCTCG AACATAAGCT GCGCGACCTT
GAGCAGCAAC ACAGTCATCT CAGTGCCTTA GTGCCACAGC TGGCAGAGTT TGCCAGCCTT
GAACAAGCTT TAGCGCAGGC TAAAGAGATA CTGCAACACA CCAAGTTGCA GGGGCAGGAG
AGTAAAAATG CGCTTGCAGC TTTAGTTGAG CAGCGCAGCC ATTGTGAGAA TCAACAGCCA
GCCTTGCAAC AGCAAAGTGA GCAGCAACTT GCCACTGCGC AGGCGCTGCA GCAGTACCGT
CATATGCTCG AGCAGTTCAA GCAGTGGCAA CAAATATGTG CCAAAGTCGC GCACACTCAA
GGGATTCTTG AGCAGGTCGG CTCACAAGGA AAAGCACTTA ATACCCAATA TCAAGGAGCC
TCAACGGCTT ACAAGTCTTT GCAGCTGACA TGGTTTCAAG GTCAGGCTGC TATTTTAGCT
AGAGAGTTAA AACCCCATGA GCCATGCCCA GTTTGTGGCA GTTCGGCCCA TCCTCAACCC
GCGGTGAGCC ATGAGGAGTT GCCAACGGAT CTACAATTGC AAGCGGCGCA GGATGCCGAG
GCCTTGGCGC TCGATAATCT CAATAAAGCG CGGACAGAAT ATCGCGGGCT GCAAAAGCAA
TTAGAAGCAC AGCAACAGCA GGCGAATGAG CTGGCAACAG CCCTTGGTGA TAAGGTTGAG
TTGTCGCTTG AATCCCATCG CCAAACGTTA GACGAACTGA CACTGCAAGC CAAACAGGCA
GACGCTGCGG CGCAAGCGCT ACAGCAGTTA CAGGAACAGA TCAAAACCTT GCAACAGCAA
GAGTCGACAT TGACGCAGCA ATTAGAACTT GAGCGTGAGC GTTACCGTGA ACAAGAAGGT
AAAGTCGAGC GCTTATCGGG TCAATTTGCG GAAAAAGCGC TGCGGATCCC AGAGGAATAC
CGAACACTGG AGGTATTGAA TCAAGCGATT GCAGATAATC AGCAGCAACT CGAGCAGATA
AAACGTCAGA TTGATGCGCT CAGAGCCGCG CAGCAGCAGG CGGCGCAGCA GAGTGTGGCG
GCGCAAACGG CATTGTCGGC GGCGATAGAG CATTGTAATG GCGCGGCAGA TCTGCAGGTG
CAAGCACAGC AGGCACTATT AGCGGCGCTG GATAATGCAG GCTTTACCGA TAGAGATGCA
TTGCGCGAGG CCTTATTAAC GGATGAGCAA ATGCAGGCGC TAGCTGAGGG CATAGAGACC
TATCATAGGC AGTGCTCCTT AAATCAGTCG CAACTGACTC AGCTTAAAAC CAAGTTGAGC
GAGTCGACAT CACCCGATCT TGATGCTTTA GAGGCCTTGC TCACGGAGCG ACTCGCACAG
CTTAAAACGG CGGAAGAGGT ATGGAGTCAA CTCAACACTC GGCTCACCCT ACTTAACAAT
ACCCAAACTC AGCTGGCGAT TGTTGATCAA AAGGCCAAAT CCCTTGAGGA TGAATACGCT
GTGATTGGCA CTTTGGCCGA TGTTGCCAAT GGTAATACCG GCAACAAAAT TTCCCTGCAA
CGCTTTGTAC TCAGCGTATT GCTCGACGAT GTGTTACTTG CGGCAACGCA GAGGCTGCAT
TTAATGAGTA AAGGGCGCTA CCGATTATTG CGCAAGGAAG ACAGAGCTAA GGGCAATAAG
GCTTCAGGGC TGGAGCTTGA AGTCGAGGAT GCCTACACCT CTAAAGTGCG TCCCGTGGCG
ACCTTAAGTG GTGGTGAGAG TTTTATGGCG GCCTTGTCGA TGGCCTTGGG CTTATCGGAT
GTGGTTCAAG CCTACGCTGG GGGGATAAAA CTCGATACCT TATTTATCGA CGAAGGCTTT
GGTAGCTTAG ATCAGGACTC ACTCGAACTT GCCATTCGAA CCCTAATGGA TTTGCAGTCG
GCGGGCAGGA TGATTGGGGT GATTTCCCAT GTGTCTGAAA TGAAAGAGCA GATAGGCACC
CGAATTGATA TCTTGAAAAC CTCCCATGGG AGTGAAATCA AGGTGATTTT GCCTTAG
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| Protein sequence | MKPLTLSMSA FGPFASTQTI DFTELGDNPL FLINGPTGAG KTTLLDGICF ALYGKTTGNE
REGSQMRCDM ADDNLLTEVT FSFQLGSTSY RIRRVPEQER LKKSGDGSTV QKSEAQLYKI
APDGSETLIV ASKVSDATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKAREQIFSQ
LFQTHIYKRI EDTLKAKAAD IRNLVKEQRA RRDGILQTAA LTSDDELAAE FSRIEPEFAA
ATAAKEQSVA AHLAALKQRD SAQQLFAEFT RLQELQAEAL SLNEQQAQIA TQTARLDVAK
QAIRVKPLLD NVLSREQEAS LAAAQRDSVQ STHDAAKIAL AQAETAAQEI IPLEHKLRDL
EQQHSHLSAL VPQLAEFASL EQALAQAKEI LQHTKLQGQE SKNALAALVE QRSHCENQQP
ALQQQSEQQL ATAQALQQYR HMLEQFKQWQ QICAKVAHTQ GILEQVGSQG KALNTQYQGA
STAYKSLQLT WFQGQAAILA RELKPHEPCP VCGSSAHPQP AVSHEELPTD LQLQAAQDAE
ALALDNLNKA RTEYRGLQKQ LEAQQQQANE LATALGDKVE LSLESHRQTL DELTLQAKQA
DAAAQALQQL QEQIKTLQQQ ESTLTQQLEL ERERYREQEG KVERLSGQFA EKALRIPEEY
RTLEVLNQAI ADNQQQLEQI KRQIDALRAA QQQAAQQSVA AQTALSAAIE HCNGAADLQV
QAQQALLAAL DNAGFTDRDA LREALLTDEQ MQALAEGIET YHRQCSLNQS QLTQLKTKLS
ESTSPDLDAL EALLTERLAQ LKTAEEVWSQ LNTRLTLLNN TQTQLAIVDQ KAKSLEDEYA
VIGTLADVAN GNTGNKISLQ RFVLSVLLDD VLLAATQRLH LMSKGRYRLL RKEDRAKGNK
ASGLELEVED AYTSKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF
GSLDQDSLEL AIRTLMDLQS AGRMIGVISH VSEMKEQIGT RIDILKTSHG SEIKVILP
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