| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2567 |
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| Symbol | |
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| ID | 4479229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3068272 |
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| End bp | 3071568 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727170 |
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| Product | RNAse E |
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| Protein accession | YP_870200 |
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| Protein GI | 117921008 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA TGTTAATCAA TGCAACTCAA TCAGAAGAGT TGCGTGTTGC CCTGGTTGAC
GGGCAACAAC TGTACGATCT GGATATTGAA AGTCCTGGTC ACGAGCAAAA AAAATCCAAC
ATTTACAAGG GTAAAATTAC CCGCGTAGAA CCCTCTTTAG AAGCCGCTTT CGTTGATTAT
GGTGCCGAGC GCCACGGCTT TTTACCGCTA AAAGAAATCG CCAGAGAATA CTTCCCTAAA
GGTTATTCTT TCCAAGGTCG CCCAAACATC AAAGAAGTGG TCAGTGAAGG ACAAGAAGTT
ATTGTTCAAA TTGACAAAGA AGAGCGCGGC AACAAAGGTG CGGCACTGAC GACCTTTATC
AGTTTAGCGG GTTCTTACTT AGTCTTGATG CCAAACAACC CTCGTGCTGG CGGTATTTCT
CGCCGTATCG AAGGTGACGA GCGCACCGAA TTAAAAGAAG CCATGGCCGA TTTAGAAGTC
CCTGCGGGTA TGGGCTTAAT TGTGCGCACC GCAGGTGTTG GCAAAGAATC GACTGAACTG
AAATGGGACT TAAAAGTTCT ACAGCACCAC TGGGCTGCGA TTACCGAAGC GGCGCAAAGC
AAACCCGCTC CTTTCTTAAT TCACCAAGAA AGTAACGTGA TTGTACGTGC AATTCGTGAC
TATCTGCGCC GCGATGTGGG CGAGATTTTA ATCGACCACC CACGTATTTT TGAAGAAGCC
AAACAGCATA TCGCACTGGT ACGCCCTGAT TTTGTTGAGC GTGTAAAACT CTACGAAGCT
GAAGTGCCAT TATTCACTCA CTTCCAAATC GAGTCGCAAA TCGAATCGGC GTTCCAACGT
GAAGTGCGTC TGCCATCGGG CGGTTCGATT GTTATCGACC CGACTGAAGC ATTAACCTCA
ATCGATATCA ACTCTGCCCG CGCAACTAAG GGCGGCGATA TCGAAGAAAC CGCATTAAAT
ACCAACCTTG AAGCCGCCGA TGAGATTGCC CGTCAATTAC GTCTGCGTGA CTTAGGTGGT
CTGGTCGTGA TCGACTTCAT CGATATGACG CCTGTGCGCC ATCAACGCGA AGTCGAAAAC
CGCCTGCGCG ATGCCGTGCA CCACGACCGT GCCCGCGTGC AATTAGGCCG TATTTCTCGC
TTCGGCCTGA TGGAAATGTC ACGTCAACGT CTGCGCCCTT CGTTAGAAGA ATCGGCTGCG
CATATCTGCC CTCGCTGTCA TGGCCAAGGC ACTATTCGTA GTACCGAATC TTTAGCTCTG
TCGATTCTGC GTTTGATGGA AGAAGAAGCC ATCAAAGAAA ACACCTCACA AATCGAAGCC
ATAGTGCCTG TCGATGTGGC GGCCTTCCTG CTGAACGAAA AACGCAAAGC GATTCGTATC
ACAGAGCAAC GCCATGATGT GGAAGTCTAT GTGATCCCAG ATCCGCACAT GATGACCCCA
GATTATCGCG TCATTCGTCA CCGCACCGAC GATGAAATCG ATGAATCTAG CTACAAGCGC
ATCGAACAGC CAGAAGCCAA GTTATACGAA CCCCGTAAAC TGGAACGCAC TGCTGCGCCT
GCACCAGCCC TAAAAGGCTT CACTGCACCA CAGAAAGTAG AACAAGCCGC CGCACCAACT
GCCAACAAAG TGGAAGCAAC AGAGCCAGGT TTCTTCAGCA AACTGTTCAG TGCCATTGGC
GCCTTCTTCA GCTCAAGCGA TAAGCCTGCG GCTGAAAAGA CCACAGAAAC CAAAAAGTCT
GACAGCCAAA CGGCCAATGC GAACCGTCGT AATCGTCGTA ATGACACTCG CCGTACTCGC
AATAACCAAG ATGCAGACAA AGCGAAAGAA GGCACCCGCG AGCCACGCAC CCGCAATGCC
AAGAAGTCGG CTGATGCACC TCAGGCTCAG GAGCGTCCAG CTCGTGAAAA AGACGAGAAT
GCAAAACGCA CTAAGCCAGA GCCTAAGAGC CGTAACCAAG CACCAAAAGA AGTGGTCGCG
GAGTCTCAAG ACGACACGCC AAAGCAAGAA GTGGCCCGTG AGCGTCGTCA GCGCCGTAAC
ATGCGTCGTA AAGTACGCAT CGATAACGCC AATGAAACCT CTGAAGCGCC AATTCAAGAA
GAAGTGATAT TAGCCGAAGT GGCCGCTGTT AATGCTGCCA ATACTGACGT TGCAACTGAA
CCACAATCTG AAACCAAAGC ACCACGTTCA CGTCGCCAGC CACGTAAAGA AACCGCGGTT
GCCAATGAGA CAGCAGAAGC TACTGATGCA GTAAGCCAAG CTGAAGCAAG TACTGAAGTG
GCTGTAGAAG CGCCTGTAGT AGAAAACCGT GCTGATGCGC CTTCTGACGT AACAGAAAGC
GTTAAGACTG AAGCCGAGAC CGATGCGGAT AACGCAGACG TCAGCGCCGA TGCAGATGAT
AAAGCGAAAC GTGAATCTCG CGATGGACAA CGTCGTAGTC GCCGCAGCCC ACGTCATTTG
AGAGCGGCTG GCCAACGTCG TCGCCGTGAT GAAGATGAGC AAGGCGCCTC TGCACCTGCG
CAATTCGTAC CAAACGATGC ATTGGGTGAC GATCAAGACT ACCCTGCTCC AAGCGCTCAA
ACGGCAGAAG CAGCTGAGAC CACTGAAGCA AAAGCAATTG AAGTCGCGGC TGAATCGACT
GTGACTTCTC CTGCAACTGT AGTCGAAGCA GCAGATGTCA GTGTGGTTGC TGAAACCACC
GCCAGTAACG CTGTTGAGAC TGAAGTTATT GAGGCAGTTG CTACCGAGCA AGTGGCTGAG
ATTAAAGCCG AAGTTGCAAC AACAAAAGCT CCTGCAGACA CTGCGGTAAA CAACAAGGCT
GAGACAAGCG TTAAAACAAA AGAAGTTGCT GTTGAGCCAG TGAAAACTGT AGAAGCGGTA
ACGGAAGCCG TTGTGGCTCC AGCCGAAACT CCGGCTCAAC CAAAAGCAGA AGCAAAGGCC
GTTGCAGTTG AAGCCGTAAC GCCTGAAGCA GACAAAGCCG AAGCAAAAGA AGCCATGAAG
TCTGTGGCCT CTGCGCCAAT GGCAAAACCC GCTCCTATCG TTAAACCACA GGCAAAACCC
GTTGTGACTC AATCTGTCGA AGCAGCGCCT ACAGCTGAAG CTGTGGTGAG CAAACCCAAA
GCGGCGAGTC GTTTTGGTTC TATGGTGTCA TCAGAAATGA CCAAGCCAAC GGTAGAAGTT
AGAGCTCAGG TTGAAGTACC AAAAGGTCGC GAGTATGACA GTGTCGCCTC TGCCGAAGCG
GCTGCGCCTA AACTGAAACA CAGCAACAGC GCCGAATCGG ATATGGCTCG TCCATAA
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| Protein sequence | MKRMLINATQ SEELRVALVD GQQLYDLDIE SPGHEQKKSN IYKGKITRVE PSLEAAFVDY
GAERHGFLPL KEIAREYFPK GYSFQGRPNI KEVVSEGQEV IVQIDKEERG NKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDERTE LKEAMADLEV PAGMGLIVRT AGVGKESTEL
KWDLKVLQHH WAAITEAAQS KPAPFLIHQE SNVIVRAIRD YLRRDVGEIL IDHPRIFEEA
KQHIALVRPD FVERVKLYEA EVPLFTHFQI ESQIESAFQR EVRLPSGGSI VIDPTEALTS
IDINSARATK GGDIEETALN TNLEAADEIA RQLRLRDLGG LVVIDFIDMT PVRHQREVEN
RLRDAVHHDR ARVQLGRISR FGLMEMSRQR LRPSLEESAA HICPRCHGQG TIRSTESLAL
SILRLMEEEA IKENTSQIEA IVPVDVAAFL LNEKRKAIRI TEQRHDVEVY VIPDPHMMTP
DYRVIRHRTD DEIDESSYKR IEQPEAKLYE PRKLERTAAP APALKGFTAP QKVEQAAAPT
ANKVEATEPG FFSKLFSAIG AFFSSSDKPA AEKTTETKKS DSQTANANRR NRRNDTRRTR
NNQDADKAKE GTREPRTRNA KKSADAPQAQ ERPAREKDEN AKRTKPEPKS RNQAPKEVVA
ESQDDTPKQE VARERRQRRN MRRKVRIDNA NETSEAPIQE EVILAEVAAV NAANTDVATE
PQSETKAPRS RRQPRKETAV ANETAEATDA VSQAEASTEV AVEAPVVENR ADAPSDVTES
VKTEAETDAD NADVSADADD KAKRESRDGQ RRSRRSPRHL RAAGQRRRRD EDEQGASAPA
QFVPNDALGD DQDYPAPSAQ TAEAAETTEA KAIEVAAEST VTSPATVVEA ADVSVVAETT
ASNAVETEVI EAVATEQVAE IKAEVATTKA PADTAVNNKA ETSVKTKEVA VEPVKTVEAV
TEAVVAPAET PAQPKAEAKA VAVEAVTPEA DKAEAKEAMK SVASAPMAKP APIVKPQAKP
VVTQSVEAAP TAEAVVSKPK AASRFGSMVS SEMTKPTVEV RAQVEVPKGR EYDSVASAEA
AAPKLKHSNS AESDMARP
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