Gene Shewana3_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2559 
Symbol 
ID4479221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3061140 
End bp3062066 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content49% 
IMG OID639727162 
Product[Acyl-carrier-protein] S-malonyltransferase 
Protein accessionYP_870192 
Protein GI117921000 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000320624 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG TAGCTTTTGT ATTCCCAGGC CAAGGTTCAC AGGCTCTAGG CATGTTAGCC 
GAGCTGGCTG GTGCACAGCC GATTGTGGGA CAAACCTTTG CCGAAGCGAG TGAGGTGTTA
GGGTATGATC TGTGGGCATT AGTGCAAGAC GGCCCCGCAG AAACCTTAAA TGAAACCGAT
AAAACCCAGC CTGCTTTATT AGCGGCAAGT GTGGCCATTT GGCGCGCTTA CGTTGCTTCA
GGTAAAGCTA TGCCTGCAAT GTTAGCGGGT CACAGCCTAG GCGAATATTC TGCATTAGTT
TGTGCTGGTG TCATCGACTT TAAAGATGCG ATCAAACTGG TTGAGCTACG TGGTCAACTG
ATGCAGCAAG CCGTGCCAGC GGGTACTGGC GCTATGTACG CGATTATCGG TCTTGATAAT
GACGGTATTG CTAATGCGTG TATTGAAGCA GCCCAAGACG AAGTGGTGAG CCCAGTTAAC
TTCAACAGCC CAGGCCAAGT GGTTATCGCC GGTCAAAAAG AAGCGGTTGA ACGTGCAGCT
GCTGCCTGTA AAGCGGCGGG CGCCAAAATG GCGGTTGCTC TGCCTGTCAG CGTGCCATCA
CACTGCGCAT TAATGAAACC TGCTGCTGAT AAATTAGCGG TAGCTTTAAA TGATGTGCAG
TTTAATGCGC CAAGCATCAC TGTTATCAAT AACGTAGATG TGGCATCACC CACTGCGGTT
GCCGACATTA AAGATGCGCT GGTTCGTCAA CTGTATTGCC CAGTACGCTG GAGCGAAACC
GTTGAATTAA TGGCCGAAAA AGGTATTACA CAGTTAGTTG AGTGTGGTCC TGGTAAAGTA
TTGACAGGTC TTGCGAAACG CATTAATAAA TCTCTTTCTG CCCAAGCAGT TAATGACGTT
GCATCCCTTG CCGCGTTAAC TGAATAA
 
Protein sequence
MENVAFVFPG QGSQALGMLA ELAGAQPIVG QTFAEASEVL GYDLWALVQD GPAETLNETD 
KTQPALLAAS VAIWRAYVAS GKAMPAMLAG HSLGEYSALV CAGVIDFKDA IKLVELRGQL
MQQAVPAGTG AMYAIIGLDN DGIANACIEA AQDEVVSPVN FNSPGQVVIA GQKEAVERAA
AACKAAGAKM AVALPVSVPS HCALMKPAAD KLAVALNDVQ FNAPSITVIN NVDVASPTAV
ADIKDALVRQ LYCPVRWSET VELMAEKGIT QLVECGPGKV LTGLAKRINK SLSAQAVNDV
ASLAALTE