| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2522 |
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| Symbol | |
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| ID | 4477573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3015742 |
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| End bp | 3019182 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727120 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_870157 |
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| Protein GI | 117920965 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00042371 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCTAA CCTTAGTCGT CGCCGTTATT GCTATTTGTT ATGTCTCACT TTTATTCCTT
TTAGCCTGGG GCGCGGAGCG TTGGTTTAGC GGCGTGACCA AGAAGCTTCA GGTAGGCATT
TATGGTTTAA GTCTGGCGGT TTATTGTTCT TCCTGGAGCT TTTTAGGTAC CGTAGGGCAG
TCGGCTAATG ATTTTTGGTC CTTTATCCCG ATTTTTATCG GTCCTATCAT TATTTTCACC
TTAGGTTTTG GCATGCTGCG CAAGATGGTC CTCGTGTCCA AGGCGCAAAA TATTACCTCG
GTCGCCGACT TTATCGCCGC CCGTTACGGT AAGTCACAAA CCTTGGCGGC CATTGTTACC
CTCATCGCGC TATTTGGCAT CATGCCCTAC ATTGCCCTGC AACTTAAGGC GATGGTATTT
AGCCTTAATT TGTTTCAGCC AGCAGACGAT CCTTTAAACG GCATTACTAT CCCTTTACTT
ATCACAGCAT TGCTGGCGAT TTTTGCCATT CTATTTGGGA CGCGTAAGCT CGACGCTACC
GAGCATAACC CCGGCATGAT GCTGGCGATT GCCTTTGAAT CGTTAGTCAA ACTGGCGGCA
TTTTTGCTGG TGGGGATTGT GATTAGCTTT GGGGTGTTCG ACGGTTTTGG TGATATCTGG
CAGCAAGCAA GCGAAAAAGC CTTAATTAAT TACCCAAATC CGCGAATCGA AGCCTTAATG
CCTGAGCTAC TCGTTGGCAT GGCTGCGTTT TTATGTATGC CGCGGCAATT CCACGTGATG
GTGGTGGAGT GCGCCGATGA GTCGGTGTTG TCAAAGGGGC GCTGGTTGTT CCCGCTGTAT
TTGGCCTTAT TTGGCTTATT TGTTGGGCCA CTGGCACTAG CGGGTAAAGT CATCCTTGGG
GATAGCGTTG CCGCAGACAC TTATGTGATC AATTTACCGC TTGCGTTAGA TCATCCACTG
CTCGCCGTGA TTGCGCTGTT AGGCACTTTA TCAGCGGCGA CTGGCATGGT AATTGTGGCG
GTAGTGACAA TAAGCGTGAT GGTGAGTAAC GAGTGGCTGG TGCCCGTGAT GCTGCGCACG
GGCAATATCC GTGAGAAAAA CTTTAGCCAG TTTTCGCAGA TGCTGTTAAA TGCACGCCGC
CTGGCCATCG TCATCATCCT TGGCCTGGGT TATGGCAGTT ATCTGGCGCT CGCCGACAGT
GACTCGCTAT CGCACCTTGG GATGTTATCC TTTGGGGCGT TTGCCCAGCT GGCTCCTGCG
CTGGTGGGAG GGCTCTATTG GAAGCACGGT AATCGTGCCG GGGTGTTTTT AGGCTTAAGT
GTGGGCTTTG GCCTGTGGTT TTACATCATG CTGAGCGGCA TGAATGACGG CCAAAATGTG
GCGACCTTAT TGTCGAGTAA TATCGACCTG TTAGATGCCA TTACCCCCAA TGTGCGCGAT
GCGCTCACAG CCTTGTTTGC CAATATTGCC TGCTACATCT TAGGCTCGAT TTGGTTTAGG
GCGGGGGTGG CCGAGCGTAT TCAAGCCAGC GCCTTTGTCA GCCCGGGTAA GCTTAAAAAT
AATGCCAATA AGAAAAATGG CCCTATCTCC CAGCAGGACT TGCTTATCTT AGCCAGCCGC
TTTGTTAGCC CAACCCGCGC CTATGAAAGC TTTAGCCGAT TCTCAACTGA GGCGGTTAAG
AGTGACAGCT GGCACAAGGC CGCAACCCCT GAGCTTATCG CCCACACCGA ACGCTTACTC
GCCGGGGTGC TTGGCGCATC GAGTGCTTCC TTGGTAATGG ACTCAGTTTT ACAGGGGCGC
GACTTGGCGC TCGATGAGGT CTTTAGCCTT GTCGATGAAG CCTCATCGAA AATCATGCTC
AGCCAAGATA TGCTGCGCGG GGCTATCGAG CATGCCTATG AGGGGATGAG TGTTATCGAC
AGCGACCTTA ACTTGGTGGC ATGGAACTAC AAATACGTGG AGCTGTATCA ATATCCTGAA
GGTTTTTTAC AGCAAGGTAT GCCGATTGGC GAAGTGATCC GCTTTAACGC GGCGCGGGGA
TATTGCGGCG AGGGGGATAT TGAGTCGCAG GTCGAAAAAC GTGTGCAGCA TATGCGTAAT
GGCACGCCGC ATACCTCAGA GCGGCAACGT AAAGACGGTA AAGTGATTAA AATTCAAGGC
AATCCTATGC CAGATGGCGG CTTTGTGATG ACTTTTACCG ACATCACTCA ATACCGCGAG
CAGGAACGGG CTTTGCTTGA GGCCAATGAA ACCCTCGAAT CGCGCGTTAA AGAGCGAACC
TACGAGTTAG CCATGCTAAA CAGTGAATTA CTTGAGGCCA AGGCGCAGGA AGAAATGGCG
AACGCTTCTA AGAGTCGCTT TTTAGCGGCG GTAGGGCACG ATTTAATGCA ACCCTTAAAT
GCGGCAAGGC TGTTTACTGC TTCTTTGTCC CAATACCCTA ATTTGGACCG CGAGGCGCGC
ACCACCCTAT CCCATGTAAA TAGCTCGCTC AAAACAGCGG GCGAGTTGCT CACCGACTTA
TTGGATATTT CGAAGCTGGA TTCCGGCATG GTGGAGGTCA ATCGCCGCGA CTTTGCCATA
TCCGAGCTGC TCAATGGTCT GTCGGTCGAA TTTGAGGCGA TGGCGGCGGA CAATCAAATT
CGCTTTAAGA TGGTCCCCTG TAGCGCGACG GTTAATTCCG ATCCTTCGTT ACTGCGGCGT
GTGCTGCAAA ACTTCTTAAC CAATGCTTAC CGTTATGCCC GAGGTGGGCG GGTGCTGTTT
GGCTGTCGCC ATCGCGGCAG TGAGTTAGAG ATCCAAGTAT TAGATACGGG CTGCGGGATT
GATGAGCACG AAACCCGTGA AATTTTCAAA GAGTTTAAGC GCTTAAATAA TCCACGTAGT
AAAAGCGTTA GCGGCCTTGG CCTAGGGTTG GCGATTGCCG ATAGGATCAG CCGGGTACTA
AACCACAGTA TTCAAGTGTC CTCACAACTT GGACGTGGTT CAGTGTTCTC TATAAGTGTG
CCTTTAGGGG AAACCGTGCG TCAGCCGCAG GTGAAGGCGT TGCCATCGCT ATTGCAACCT
TTGTCTGGCA TTAAAGTGCT ATGCATCGAC AACGAAGAGG CCATTTTGGC GGGGCTTGAG
AGTCTACTCA GCCGCTGGCA GTGTGAGGTG ATTTGCGCCA AGGATTTAGC CGATGCGCGC
ATAAAGTTAG GCCTAAAAGG GGTGGCGCCG GATATTGTTT TAGCGGATTT CCACTTGGAC
GATGGCCAAA ATGGTGTCGA TGCGATGGAT GGGATCCGCG CGCTCTATGG CAAAGAGTTA
CCGGGCATTT TAATCACGGC CAATACCCGT AAGGAGCTGG TGGAGGATGT GCAGCGCCGG
GGTTACCACT ATATGGCGAA AATGATTAAA CCGGCGGCGC TGCGGGCATT GATTTCGAGC
CTAGTCAAGG CGAGTCGTTA A
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| Protein sequence | MNLTLVVAVI AICYVSLLFL LAWGAERWFS GVTKKLQVGI YGLSLAVYCS SWSFLGTVGQ
SANDFWSFIP IFIGPIIIFT LGFGMLRKMV LVSKAQNITS VADFIAARYG KSQTLAAIVT
LIALFGIMPY IALQLKAMVF SLNLFQPADD PLNGITIPLL ITALLAIFAI LFGTRKLDAT
EHNPGMMLAI AFESLVKLAA FLLVGIVISF GVFDGFGDIW QQASEKALIN YPNPRIEALM
PELLVGMAAF LCMPRQFHVM VVECADESVL SKGRWLFPLY LALFGLFVGP LALAGKVILG
DSVAADTYVI NLPLALDHPL LAVIALLGTL SAATGMVIVA VVTISVMVSN EWLVPVMLRT
GNIREKNFSQ FSQMLLNARR LAIVIILGLG YGSYLALADS DSLSHLGMLS FGAFAQLAPA
LVGGLYWKHG NRAGVFLGLS VGFGLWFYIM LSGMNDGQNV ATLLSSNIDL LDAITPNVRD
ALTALFANIA CYILGSIWFR AGVAERIQAS AFVSPGKLKN NANKKNGPIS QQDLLILASR
FVSPTRAYES FSRFSTEAVK SDSWHKAATP ELIAHTERLL AGVLGASSAS LVMDSVLQGR
DLALDEVFSL VDEASSKIML SQDMLRGAIE HAYEGMSVID SDLNLVAWNY KYVELYQYPE
GFLQQGMPIG EVIRFNAARG YCGEGDIESQ VEKRVQHMRN GTPHTSERQR KDGKVIKIQG
NPMPDGGFVM TFTDITQYRE QERALLEANE TLESRVKERT YELAMLNSEL LEAKAQEEMA
NASKSRFLAA VGHDLMQPLN AARLFTASLS QYPNLDREAR TTLSHVNSSL KTAGELLTDL
LDISKLDSGM VEVNRRDFAI SELLNGLSVE FEAMAADNQI RFKMVPCSAT VNSDPSLLRR
VLQNFLTNAY RYARGGRVLF GCRHRGSELE IQVLDTGCGI DEHETREIFK EFKRLNNPRS
KSVSGLGLGL AIADRISRVL NHSIQVSSQL GRGSVFSISV PLGETVRQPQ VKALPSLLQP
LSGIKVLCID NEEAILAGLE SLLSRWQCEV ICAKDLADAR IKLGLKGVAP DIVLADFHLD
DGQNGVDAMD GIRALYGKEL PGILITANTR KELVEDVQRR GYHYMAKMIK PAALRALISS
LVKASR
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