Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2494 |
Symbol | |
ID | 4477545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2985410 |
End bp | 2985958 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639727092 |
Product | nitroreductase |
Protein accession | YP_870129 |
Protein GI | 117920937 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.838709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00693244 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGACGCTA TCGAACTTTT ACTCACCCGC CAATCCACCC CAAGATTAAC CGCGCCAGCG CCCAACGAGC ATGAGCTTAA AATCATTTTA GATTCGGCGA TTCGAGCGCC AGATCATGGC GCCTTAGCAC CGTGGGAATT TATTATTGCC ACAGGCCAAG GGTTAGACAC CTTAGCGGAT ATCTATGTCA ACGCGGCCAA AGCCAGCGGC GCCGATGAAG ATTTTATCAA TAAAGCCAAA GGGATGCCGA TGCGCGCGCC TATGGTGATT ACGGTTGTGG CGAAAACCCA ACAACACCCT AAAGTGCCAG TGCTTGAGCA GCAAATCGCA GCGGGCTGCG CCACGATGGC GATGCAGCAA GCGGCATTCG CGCTAGGATT AGGCGCAGTG TGGCGCACCG GGGATTTTGC CTTCGACGCC AATGTGAATG CGGCATTAGG CTTAGCACCA GAGGACCAAA TCGTCGGCTT TTTATACGTG GGCACCCCTG CGGTAGCCGC ACCGAAAAAG CCGCAAAAGG ATGGCAGCCA GTACGCCCGC TACTTATAA
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Protein sequence | MDAIELLLTR QSTPRLTAPA PNEHELKIIL DSAIRAPDHG ALAPWEFIIA TGQGLDTLAD IYVNAAKASG ADEDFINKAK GMPMRAPMVI TVVAKTQQHP KVPVLEQQIA AGCATMAMQQ AAFALGLGAV WRTGDFAFDA NVNAALGLAP EDQIVGFLYV GTPAVAAPKK PQKDGSQYAR YL
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