Gene Shewana3_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2494 
Symbol 
ID4477545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2985410 
End bp2985958 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content54% 
IMG OID639727092 
Productnitroreductase 
Protein accessionYP_870129 
Protein GI117920937 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.838709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00693244 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGACGCTA TCGAACTTTT ACTCACCCGC CAATCCACCC CAAGATTAAC CGCGCCAGCG 
CCCAACGAGC ATGAGCTTAA AATCATTTTA GATTCGGCGA TTCGAGCGCC AGATCATGGC
GCCTTAGCAC CGTGGGAATT TATTATTGCC ACAGGCCAAG GGTTAGACAC CTTAGCGGAT
ATCTATGTCA ACGCGGCCAA AGCCAGCGGC GCCGATGAAG ATTTTATCAA TAAAGCCAAA
GGGATGCCGA TGCGCGCGCC TATGGTGATT ACGGTTGTGG CGAAAACCCA ACAACACCCT
AAAGTGCCAG TGCTTGAGCA GCAAATCGCA GCGGGCTGCG CCACGATGGC GATGCAGCAA
GCGGCATTCG CGCTAGGATT AGGCGCAGTG TGGCGCACCG GGGATTTTGC CTTCGACGCC
AATGTGAATG CGGCATTAGG CTTAGCACCA GAGGACCAAA TCGTCGGCTT TTTATACGTG
GGCACCCCTG CGGTAGCCGC ACCGAAAAAG CCGCAAAAGG ATGGCAGCCA GTACGCCCGC
TACTTATAA
 
Protein sequence
MDAIELLLTR QSTPRLTAPA PNEHELKIIL DSAIRAPDHG ALAPWEFIIA TGQGLDTLAD 
IYVNAAKASG ADEDFINKAK GMPMRAPMVI TVVAKTQQHP KVPVLEQQIA AGCATMAMQQ
AAFALGLGAV WRTGDFAFDA NVNAALGLAP EDQIVGFLYV GTPAVAAPKK PQKDGSQYAR
YL