Gene Shewana3_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2479 
Symbol 
ID4476660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2964842 
End bp2965636 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content52% 
IMG OID639727077 
Producthypothetical protein 
Protein accessionYP_870114 
Protein GI117920922 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00285287 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGAC GTTGCCATGA AGTGGACTAT GAGATTATCG GTCACAGCAT GCAGCTGGTT 
GAGGTGGAAC TTGACCCGCA CGAGACTGTG ATCGCCGAAG CCGGCGCGAT GAATTATCTA
GAGCAAGACA TTAGCTTCGA GGCCAAAATG GGTGATGGCT CCGAGCCTGA ATCTGGCTTT
TTTGGCAAGT TGATGGGAGC GGGTAAACGT GTGCTGACGG GGGAGAGCAT CTTTATGACA
CACTTTACGA ACCTCGGGCA TCAGAAACGT AAAGTGGCGT TTGCCGCGCC CTATCCAGGG
ACGATTTTGG CTATCGATCT CGCTCAATAT GGTGGAGAGC TGATTTGTCA GAAAGATAGT
TTCCTCGCCG CCGCACTAGG GACTCGAGTG AGCATGAAGT TTAATCGCCG CCTAGGCACG
GGCTTTTTCG GGGGTGAAGG TTTTATTCTG CAAAGCTTGC AGGGCGATGG CATGGCGTTT
ATCCATGCGG GTGGCACCTT AATAAAGAAA GAGTTAAAAG GCGAAACCTT ACGCGTCGAC
ACAGGTTGTT TGGTCGGCTT TACCCCTGGT ATTGATTACG ATATCGAGCG CGCTGGCTCG
TTAAAATCGA TGGTCTTTGG TGGAGAAGGG CTGTTTTTAG CGACCTTAAA AGGCCATGGT
ACAGTGTGGC TGCAGAGCCT ACCCTTCTCG CGGATGGCGG ATCGCATTAT TGCTCACGCT
CCTTCTGCTG GTGGTAGTGA TAGAGGCGAA GGTTCAGTCC TCGGCGGACT TGGCCGCATG
CTCGATGGGC GTTAA
 
Protein sequence
MSRRCHEVDY EIIGHSMQLV EVELDPHETV IAEAGAMNYL EQDISFEAKM GDGSEPESGF 
FGKLMGAGKR VLTGESIFMT HFTNLGHQKR KVAFAAPYPG TILAIDLAQY GGELICQKDS
FLAAALGTRV SMKFNRRLGT GFFGGEGFIL QSLQGDGMAF IHAGGTLIKK ELKGETLRVD
TGCLVGFTPG IDYDIERAGS LKSMVFGGEG LFLATLKGHG TVWLQSLPFS RMADRIIAHA
PSAGGSDRGE GSVLGGLGRM LDGR