Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2479 |
Symbol | |
ID | 4476660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2964842 |
End bp | 2965636 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639727077 |
Product | hypothetical protein |
Protein accession | YP_870114 |
Protein GI | 117920922 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00285287 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAGAC GTTGCCATGA AGTGGACTAT GAGATTATCG GTCACAGCAT GCAGCTGGTT GAGGTGGAAC TTGACCCGCA CGAGACTGTG ATCGCCGAAG CCGGCGCGAT GAATTATCTA GAGCAAGACA TTAGCTTCGA GGCCAAAATG GGTGATGGCT CCGAGCCTGA ATCTGGCTTT TTTGGCAAGT TGATGGGAGC GGGTAAACGT GTGCTGACGG GGGAGAGCAT CTTTATGACA CACTTTACGA ACCTCGGGCA TCAGAAACGT AAAGTGGCGT TTGCCGCGCC CTATCCAGGG ACGATTTTGG CTATCGATCT CGCTCAATAT GGTGGAGAGC TGATTTGTCA GAAAGATAGT TTCCTCGCCG CCGCACTAGG GACTCGAGTG AGCATGAAGT TTAATCGCCG CCTAGGCACG GGCTTTTTCG GGGGTGAAGG TTTTATTCTG CAAAGCTTGC AGGGCGATGG CATGGCGTTT ATCCATGCGG GTGGCACCTT AATAAAGAAA GAGTTAAAAG GCGAAACCTT ACGCGTCGAC ACAGGTTGTT TGGTCGGCTT TACCCCTGGT ATTGATTACG ATATCGAGCG CGCTGGCTCG TTAAAATCGA TGGTCTTTGG TGGAGAAGGG CTGTTTTTAG CGACCTTAAA AGGCCATGGT ACAGTGTGGC TGCAGAGCCT ACCCTTCTCG CGGATGGCGG ATCGCATTAT TGCTCACGCT CCTTCTGCTG GTGGTAGTGA TAGAGGCGAA GGTTCAGTCC TCGGCGGACT TGGCCGCATG CTCGATGGGC GTTAA
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Protein sequence | MSRRCHEVDY EIIGHSMQLV EVELDPHETV IAEAGAMNYL EQDISFEAKM GDGSEPESGF FGKLMGAGKR VLTGESIFMT HFTNLGHQKR KVAFAAPYPG TILAIDLAQY GGELICQKDS FLAAALGTRV SMKFNRRLGT GFFGGEGFIL QSLQGDGMAF IHAGGTLIKK ELKGETLRVD TGCLVGFTPG IDYDIERAGS LKSMVFGGEG LFLATLKGHG TVWLQSLPFS RMADRIIAHA PSAGGSDRGE GSVLGGLGRM LDGR
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