| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2444 |
|---|
| Symbol | recR |
|---|
| ID | 4477321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 2931640 |
|---|
| End bp | 2932239 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639727042 |
|---|
| Product | recombination protein RecR |
|---|
| Protein accession | YP_870079 |
|---|
| Protein GI | 117920887 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00615] recombination protein RecR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000238207 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA GTCCCCTGCT TGACGAGTTA ATTCAGTCCC TGCGCTGTTT GCCAGGGGTT
GGGCCGAAAT CGGCTCAACG TATGGCGTTT CAATTGCTTG AGCGCGATAG AAAAGCTGGG
CTTAAATTAG CCTCGGCGCT GTCGAGTGCC ATGAGCGATA TCGGTCATTG TCAGTCTTGC
CGAACCTACA CTGAAGAAAG CCTCTGTCCG ATTTGTTCTA GCCATAAACG CGGGTCTTCG
TCGACGATTT GTGTGGTCGA AACGCCGGCC GATGTGTTAG CCATTGAAGC GGGTGGACAT
TTTACCGGTC GCTACTTTGT ATTGCTGGGC CATTTATCAC CACTCGATGG GGTGGGACCT
GAGGAGTTAG GCTTGGCGCT ATTAGAGCGT CACTTAGCCT CGGGCGATGT GGCTGAGCTT
ATCCTCGCGA CCAATCCCAC GGTAGAAGGT GAGGCCACCG CCCACTTTAT TGCCGATATG
GCAAGGCGCC ACAAAGTGGT GATCAGCCGT ATCGCCCACG GCGTTCCCGT GGGGGGCGAG
CTGGAATATG TCGACAGCAC CACCTTAGCG CTGTCCTTCA ATGGGCGTAT CCCGCTGTAG
|
|---|
| Protein sequence | MKFSPLLDEL IQSLRCLPGV GPKSAQRMAF QLLERDRKAG LKLASALSSA MSDIGHCQSC
RTYTEESLCP ICSSHKRGSS STICVVETPA DVLAIEAGGH FTGRYFVLLG HLSPLDGVGP
EELGLALLER HLASGDVAEL ILATNPTVEG EATAHFIADM ARRHKVVISR IAHGVPVGGE
LEYVDSTTLA LSFNGRIPL
|
|---|
| |