Gene Shewana3_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2425 
Symbol 
ID4477233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2907852 
End bp2908853 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content50% 
IMG OID639727022 
Productdi-haem cytochrome c peroxidase 
Protein accessionYP_870060 
Protein GI117920868 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.370104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAC TCACCGCTAT CGCGATCAGT ATTATGGCCA TGTTAGGCGG GCACTACGCC 
GTTGCTGCCG AACCGATTGA AGTGATTACG CCTGCTAAAA TCACTGAGCC AGAAAAAGTC
GAGCTGGGTA AGATGCTGTT TTTCGAACCT AGACTGTCGA AATCAGGCTT TATCTCCTGT
AATTCTTGCC ACAATCTTTC CACCGGTGGC GTGGATGCCC TACCTACATC GATTGGCCAC
CATTGGCAAG AGGGTCCAAT TAACTCCCCA ACCGTGCTGA ACGCCGACTT TATGCTGGCG
CAATTCTGGG ATGGCCGTGC CAGCGACTTA AAAGAACAGG CCGCGGGTCC GATTGCCAAT
CCGAAGGAAA TGGGCTTTAC CCATGAGCTG GCCACCGAAA CCATTGCCTC AATGCCCGCA
TACCGTGCTC GCTTTGCTAA GGTCTACGGT GATGACAAAG TCGATATCGA TCGTTTAACC
GATGCCATTG CCGCCTTCGA AAAAACCTTA GTCACACCGA ATAGCCCCTT CGATCAATAT
TTATTGGGTA AACAGGATGC GATTAGCAGC GAAGCCAAAG CGGGTTACCA ACTGTTTAAG
GACAAAGGCT GCGTCAGTTG CCACAACGGC CCTGCGGTCG GTGGCACTAT GTTTATGAAG
ATGGGCTTAA TCAAACCGTT CCACACCAAT AATCCTGCCG AAGGGCGTAA AGGCGTGACG
GGCAAAGAAG CCGATAAATA TGTGTTTAAA GTACCGACGC TGCGTAATAT CGAGCTCACC
TATCCCTACT TCCACGATGG CAGCGTATGG ACGCTCGAAG AAGCGGTCAA TACCATGGCA
GATATTCAGT TAGGGCAAAA GCTTACCGAC AAGGAAACCA AGGAAATGGT GTCGTTTTTA
AATTCACTCA CAGGTGAACA GCCGCAGATC ACTCTGCCAA TTCTGCCGCC ATCGAATAAA
GCGACGCCGC GCCCTGTACC ATTTGCAGCA GCAACCAAGT AA
 
Protein sequence
MIKLTAIAIS IMAMLGGHYA VAAEPIEVIT PAKITEPEKV ELGKMLFFEP RLSKSGFISC 
NSCHNLSTGG VDALPTSIGH HWQEGPINSP TVLNADFMLA QFWDGRASDL KEQAAGPIAN
PKEMGFTHEL ATETIASMPA YRARFAKVYG DDKVDIDRLT DAIAAFEKTL VTPNSPFDQY
LLGKQDAISS EAKAGYQLFK DKGCVSCHNG PAVGGTMFMK MGLIKPFHTN NPAEGRKGVT
GKEADKYVFK VPTLRNIELT YPYFHDGSVW TLEEAVNTMA DIQLGQKLTD KETKEMVSFL
NSLTGEQPQI TLPILPPSNK ATPRPVPFAA ATK