Gene Shewana3_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2393 
Symbol 
ID4479628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2871948 
End bp2872853 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content50% 
IMG OID639726990 
Productbifunctional methionine sulfoxide reductase B/A protein 
Protein accessionYP_870028 
Protein GI117920836 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC TGACTGATTT TGAACGCTAT GTCATAGAAG AAAAGGGCAC TGAACGTCCC 
TTTAGCGGTG AGTACTATAA ACATGACGCC AAAGGCGTGT ATTTGTGCAA AAAATGCCAT
GCGCCTTTGT ATCGCTCAGA AGATAAGTTT AATGCTCACT GTGGTTGGCC TGCCTTCGAT
GATGAAATTC CGGGGGCGGT GAGTCGTCAT GTCGACGCCG ATGGTCGTCG TACCGAAATC
GTCTGTAGTC AGTGTGGCGG TCATCTTGGC CATGTGTTTG AAGGGGAATA TTTAACGCCG
AAGAATATTC GTCACTGCGT TAATTCTGTC TCTATGGTGT TTCAAGCGGC CGATGAGGTG
ACAACATCGA CGCATAAAAC GGCCTTTGCG ACCTTTGGGG CGGGCTGTTT TTGGTGTGTT
GAAGCGATTT TTAAGAGCCT TAAGGGCGTG CTGAATGTCA GATCTGGTTA CTCGGGCGGC
GAGGCGAGCG ATGCCGATTA TAAGTCGGTG TGTTCGGGAT TAACTGGGCA TGCTGAAGTG
GTGCACATCG AGTTTGACCC CGCGCAAATC AGCTTTACAA CGCTGCTGCA GGTGTTATTT
GAGAGTCACG ACCCCACTAC GCTCAACCGT CAAGGCAACG ATAAAGGGCC GCAGTATCGC
TCCGTCGTCT TTACCCACGA TGCGGCGCAG ATTGAAGAGA CCAACACCAT GATTGCCAAA
TTAACCGAGG CAAAGGTATT TGATGCGCCG ATAGTGACCC AAGTGGTGGC CTTTGAGTCA
TTTTATCCCG CTGAGGATTA CCATAATGAC TATTTCGCCT TGCATGGCGA GCAGCCCTAT
TGCCAAATTG TGGTGCGGCC AAAGGTTGAA AAGATCAGAG CCCTCTTTGC TGAGCTACAA
GCATAG
 
Protein sequence
MNKLTDFERY VIEEKGTERP FSGEYYKHDA KGVYLCKKCH APLYRSEDKF NAHCGWPAFD 
DEIPGAVSRH VDADGRRTEI VCSQCGGHLG HVFEGEYLTP KNIRHCVNSV SMVFQAADEV
TTSTHKTAFA TFGAGCFWCV EAIFKSLKGV LNVRSGYSGG EASDADYKSV CSGLTGHAEV
VHIEFDPAQI SFTTLLQVLF ESHDPTTLNR QGNDKGPQYR SVVFTHDAAQ IEETNTMIAK
LTEAKVFDAP IVTQVVAFES FYPAEDYHND YFALHGEQPY CQIVVRPKVE KIRALFAELQ
A