| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2386 |
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| Symbol | |
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| ID | 4479621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2864912 |
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| End bp | 2866585 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726983 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_870021 |
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| Protein GI | 117920829 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0150062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.524068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCAGC CTTGGATTAA TCATTTGCCA AAAGATGTAC CTGCCGAGAT TAATGCGGAT
CAGTATTCAT CGCTCGTCGA TATGTTCGAG ACGGCGGTGG CCAAATATGC GGATCAACCG
GCATTTATCA ACATGGGTGC CACGCTAACT TACCGTAAAC TTGAAGAACG CAGCCGTGCG
TTTGCCGCTT ATCTGCAAAA TGAATTGAAA CTCCAAAAGG GTGACCGTGT CGCCCTGATG
ATGCCGAACC TGCTGCAATA TCCCATTGCG CTGTTTGGTA TTTTACGTGC GGGCATGGTG
GTGGTGAACG TTAACCCGCT TTACACTCCC CGCGAATTAA AGCACCAATT AGTCGACTCT
GGCGCTAAGG CCATTGTGGT CGTATCAAAC TTTGCCCGTA CCTTGGAAGA AGTTGTAGAC
CAGACGCCCG TTAAAAGCGT GATTATCACC GGGCTTGGGG ATCTGCTAAG CGCGCCAAAA
CGCACCTTAG TTAACTTTGT GGTCAAGTAC ATCAAAAAGC TGGTGCCTAA ATACGACTTA
CCCCATGCAC TTTCAATGCG CGAAACTCTC TCTAGAGGGC GCAGAATGCA GTATGTCAAA
CCCGTTATCA CGGGTGATGA CCTAGCCTTT TTGCAATACA CTGGTGGAAC GACTGGGGTG
TCAAAGGGCG CCATGTTGAC CCACAAAAAC GTGGTCGCAA ACGTATTACA GGCCAATGGT
GCCTATTCAC CCGCACTGCG TGATGGCAAC GAATTTGTGG TAACAGCCTT GCCGCTTTAC
CATATTTTTG CTTTAACAGT GAACTGCTTA CTGTTCTTAC ATAAGGGCAG CCAAAACCTG
TTAATCACTA ATCCTCGGGA TATTCCAGGG TTTGTGGCCG AACTGAAAAA ATATCCTTTT
ACGGCACTAA CGGGCGTCAA CACCCTGTTT AATGCGTTAG TGAACAGTAG CGATTTTGCG
GAACTGGATT TTTCTCGCCT AAAATTATCC ATTGGTGGCG GGATGGCGGT GCAAAAAGCC
GTGGCCGATA AATGGCAAAG CATCACGAAA ACCCGTTTAC TCGAAGGTTA CGGTTTAACC
GAAGCCTCGC CGTTACTCAC TTGCTGCCCC TATAACTTAG ACGGTTACAA CGGTTCTATC
GGTTTCCCTG CACCATCAAC CTTAATTCAA GTGCGTGATG ATGCGGGTAA TGTGTTACCG
CAGGGTGAGA CGGGTGAACT GTTTGGTAAA GGTCCACAGA TCATGAAAGG CTACTGGCAG
CGTCCAGAGG AAACGGCCAA AGTGATTGAT AAAGACGGCT GGCTTGCCAC CGGCGATATC
GGTTATATGG ATGAACAAGG CTTCTTCTAT ATCGTCGACC GTAAGAAAGA CATGATTTTA
GTGTCGGGCT TCAACGTCTT CCCCAATGAA GTTGAAGAAG TGGTCGCGTT ACATCCTAAA
GTGATTGAAG TGGCCGCCGT TGGCGTACCA AATGACGCCA GTGGTGAATT AGTGAAGGTG
TTTGTGGTTG CAAAAGATAA ATCTTTAACC GCTGACGACA TCATTAAGCA TTGCCGCGCG
CATTTAACGG GATATAAAGT ACCGAAGCTG GTAGAATTTA GGGACGAGTT ACCTAAAACC
AACGTGGGTA AGATCTTGCG ACGAGAACTT CGAGACGAAG TGAAGCGCGC GTAA
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| Protein sequence | MDQPWINHLP KDVPAEINAD QYSSLVDMFE TAVAKYADQP AFINMGATLT YRKLEERSRA
FAAYLQNELK LQKGDRVALM MPNLLQYPIA LFGILRAGMV VVNVNPLYTP RELKHQLVDS
GAKAIVVVSN FARTLEEVVD QTPVKSVIIT GLGDLLSAPK RTLVNFVVKY IKKLVPKYDL
PHALSMRETL SRGRRMQYVK PVITGDDLAF LQYTGGTTGV SKGAMLTHKN VVANVLQANG
AYSPALRDGN EFVVTALPLY HIFALTVNCL LFLHKGSQNL LITNPRDIPG FVAELKKYPF
TALTGVNTLF NALVNSSDFA ELDFSRLKLS IGGGMAVQKA VADKWQSITK TRLLEGYGLT
EASPLLTCCP YNLDGYNGSI GFPAPSTLIQ VRDDAGNVLP QGETGELFGK GPQIMKGYWQ
RPEETAKVID KDGWLATGDI GYMDEQGFFY IVDRKKDMIL VSGFNVFPNE VEEVVALHPK
VIEVAAVGVP NDASGELVKV FVVAKDKSLT ADDIIKHCRA HLTGYKVPKL VEFRDELPKT
NVGKILRREL RDEVKRA
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