| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2385 |
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| Symbol | |
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| ID | 4479620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2863731 |
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| End bp | 2864897 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726982 |
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| Product | ribonuclease D |
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| Protein accession | YP_870020 |
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| Protein GI | 117920828 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000005746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.331881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGC TTTTGTTTTT ATGGACGGTG CTTAACCCAC AGGAACTGGA GAAGAATTTG
TCAGTGTTTC AGTATGTGAG CGACGAAGCG AGCCTCAATG CCCTCGTCGC TCAATATCAA
CAGAGTCCGC TGCTCGTGTT AGATACCGAG TTTGTGCGCA CACGTACCTA TTACGCTAAG
CTTGGCCTCA TTCAAGCCTA TGATGGCAAA ACCTTAGCCT TAATTGACCC GGTTGCGCTG
CCAGATCTCA GTGCATTTTG GTCTTTGCTG GATAATCCCA ACATCATCAA ACTGGTGCAT
TCGTGCAGCG AGGACTTAGA AGTCTTCGCC CACTATGGTC AGCGTCAACC TACGCCTTTG
TTCGATAGCC AAATCGCAGC CTCTTTATGT GGCATGGGCC ATGGCCTAGG TTATGCCAAG
TTAGTGGAAA CCTGCTTAGG TGAAGTGATT GATAAAGGTG AGTCGCGCAC CGACTGGATG
CGCCGTCCTT TGACTGAGGC GCAGCTGAGC TACGCCGCCA ACGATGTGTT GTATCTGTAT
CAACTCTATC CGCAACTCGC CGACAAGCTT AAGGCACAAG ATCGCTTAGG CTGGTTGTAT
GAAGAAGGTG AACGGATGAC AGAAGGGCGC TTAGCAACGC CAGATATGGA TACTGCGTAC
CTGAGAGTCA AAAACGCTTT TCAGCTCACC GAGCATCAAT TGGCTTATCT TAAAGTATTG
GCTAAGTGGC GTTTAGAAAA AGCCTTAGCG CGGGATTTAG CCTTGGGCTT TGTGATTAAG
GATCACGGCC TGATCGCGCT AGCGAAAAAG CAGCCAAAGA GCATGGGCGA TTTGCTCAAA
TTGAACGATT TGACCGAGCA AGAGAAACGC ATTCACGGTA AAGATATTTT ACGGGTGATG
CAGACTGCGG ATTTAAGCAA TCCACCAGAA TTAGTGGATG TCTTAGCGCT AAAACCAGGT
TATAAATCGG CCTTTAAAAA CATTAAAACC TGCTTATCTG AACTGTGCGA GCAGCATGCC
ATCCCGATGG AGATGCTGGG CTCGAAACGT CATATTCATG AGTATTTACA ATGGCGTTGG
GATAAACAGC AGGGTGAGTT ACCGACAGTC TTAAGTGGCT GGCGTGGACA AATCGCCGCC
GAATCGTTGG CAAAGCTTGA CGTCTAA
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| Protein sequence | MSRLLFLWTV LNPQELEKNL SVFQYVSDEA SLNALVAQYQ QSPLLVLDTE FVRTRTYYAK
LGLIQAYDGK TLALIDPVAL PDLSAFWSLL DNPNIIKLVH SCSEDLEVFA HYGQRQPTPL
FDSQIAASLC GMGHGLGYAK LVETCLGEVI DKGESRTDWM RRPLTEAQLS YAANDVLYLY
QLYPQLADKL KAQDRLGWLY EEGERMTEGR LATPDMDTAY LRVKNAFQLT EHQLAYLKVL
AKWRLEKALA RDLALGFVIK DHGLIALAKK QPKSMGDLLK LNDLTEQEKR IHGKDILRVM
QTADLSNPPE LVDVLALKPG YKSAFKNIKT CLSELCEQHA IPMEMLGSKR HIHEYLQWRW
DKQQGELPTV LSGWRGQIAA ESLAKLDV
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