Gene Shewana3_2381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2381 
Symbol 
ID4479616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2861404 
End bp2861682 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content44% 
IMG OID639726978 
Producthypothetical protein 
Protein accessionYP_870016 
Protein GI117920824 
COG category[S] Function unknown 
COG ID[COG3100] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000571137 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.19582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATGTG CGGTTTATAA AAGTAGTCGA AAGGCTGACA CTTACTTATT TGTGAACAAA 
AGGGACTGTT TTGATGATGT TCCCCAAGCG TTGTTGGAGA TGTTTGGTGT GCCTCAGTTA
GTGATGGTGT TCCCCATCGC TAAGCGTGAA TCCCTCGGTA TCGCCGATAT TCAAAAGGTC
AGAGCAGCGC TCGAGGAAAA GGGTTTTTAT TTACAAATTC CGCCACCGCA GGTTAATTTA
TTGGCCGAAC ACAGAGAAAG CCTTGGGATT AAAGACTAG
 
Protein sequence
MLCAVYKSSR KADTYLFVNK RDCFDDVPQA LLEMFGVPQL VMVFPIAKRE SLGIADIQKV 
RAALEEKGFY LQIPPPQVNL LAEHRESLGI KD