| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2347 |
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| Symbol | |
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| ID | 4478104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2825448 |
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| End bp | 2826572 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639726942 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_869982 |
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| Protein GI | 117920790 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.161325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00157605 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAAAAC CGTTGGTGTT AATAGTTGGA AGTACCTTTA TTCTATTAAT TGGGATAGTA
GTTTGGGGTC TTAATTTTTC CTCAAAAACA CAAGATGCTG ACAGTAAATT AACGGCAGAG
ATGATGGCTA AGTCAACGTC TAAAAAGTCA CAACTACCTC CTGCGGTTAG CCTTTTTAAA
GTCACAAATC AAACGTTTAG CCAGTATATT GTATTGACCG GAACAATTGA GCCAACAAAA
GTGGCGAGTT TGGCCTCTCC GGCAGAAGGT CCGATTCTTA ATCTTGTGGT GCGTGAGGGG
GATACTGTTA ATTTAGGACA AGAGATTTTA CGCATTGGTC GAACTCATGC GGCTGATTCT
CTTCAAACAT CTGCCGCTGA AGAAGTACGT AAACAAGTAT TAAATTTAAA GCGTATTGAA
ACTTTAGTTA AGCAGCATAC TTTACCTGAG GAGCAGTTAG ACGAAGCACT ATCATCATTA
GAAAAAGCGA AGGCGGCATT GAGCCAAGCA AAACAAGCCC TTAATGATTA CATAGTGACC
GTGCCTTGGT CAGGGATTAT ATCTAAAGTC TTGGTTTCAG ATGGTCATTT CGTTATACCC
CGTAGTCCCT TGGTTGAAAT GTATGATCCA GATAGTTTGG TATTACGATT TAGCGTCGCA
GAAGCCCAAG CTTTAGTTCT TAAGAAGGGG CATAAAGTTA AAGCGACTTT TGATGGGCTT
GCTGGGCAGG AATTTGAATT AGAGATTATT CGAGCTTATC CCGATTTAGA TAGAAAGTTA
CGTACGCGTC TTTTTGAGGC GTCGCTACCT GCAAATGAGT TTATTCCTGG TATGTTTGCG
CGGATCCGAG TCGTACAGCA GGAGCACAAA AATACTCTTG TCATACCGAT TGATACGCTT
CAAGTGCAAG GAAAAGACAA AAGTGTGTTT GTAGTGACAG ATAATATTGT CACTCGACGA
TTAGTCGAAA CCGGTTTAGA GCAGGATGAT CAAATTGAAG TGTTATCGGG ACTGAAAGCG
GGTGAGATAA TCGTTCTAAC TGGCATTGAA AGGGTGAAAA ATGGCTCCGC AGTGAGAGTA
TTGGAGCAAC CCGCTGAAAA CAATAGCACG GGTGTTGAAA AATGA
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| Protein sequence | MKKPLVLIVG STFILLIGIV VWGLNFSSKT QDADSKLTAE MMAKSTSKKS QLPPAVSLFK
VTNQTFSQYI VLTGTIEPTK VASLASPAEG PILNLVVREG DTVNLGQEIL RIGRTHAADS
LQTSAAEEVR KQVLNLKRIE TLVKQHTLPE EQLDEALSSL EKAKAALSQA KQALNDYIVT
VPWSGIISKV LVSDGHFVIP RSPLVEMYDP DSLVLRFSVA EAQALVLKKG HKVKATFDGL
AGQEFELEII RAYPDLDRKL RTRLFEASLP ANEFIPGMFA RIRVVQQEHK NTLVIPIDTL
QVQGKDKSVF VVTDNIVTRR LVETGLEQDD QIEVLSGLKA GEIIVLTGIE RVKNGSAVRV
LEQPAENNST GVEK
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