Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2323 |
Symbol | fadE |
ID | 4478080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2795424 |
End bp | 2797871 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726918 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_869958 |
Protein GI | 117920766 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000178601 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.626171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTACCC TACTTTGGAT CATCGCCATG ATCTTAGTGC TAGGAGCCCT AGCTTACCTT CGGGTATCTT TGCTCACTGC CACTATTGCA GCCGCTGTTG TGATGACAGC CGGATGGACA CTCGATGTTG TCGGCCCTAT CTCTTGGATT ATCTTCCTGG TGATCGCGCT GCCCCTCAAT ATCAGTGCAT TTAGACAAAA TGTTATCAGT CGCCCACTGA TGAAGACCTA CCGTGGCATC ATGCCCGAAA TGTCTTCTAC CGAAAAAGAA GCGATTGAAG CTGGTACCAC TTGGTGGGAA GCCGATCTGT TTGCGGGTAA CCCAAACTGG AAAAAACTCC ACAACTATCC TGTCGCTCGT TTAAGTGCCG ATGAGCAAGC CTTCTTAGAC GGCCCCGTTG AAGAAGTGTG CCGCATGGTG AATCAACACC AAGTATCACA CCAACTGGCT GATTTGCCTG CTGAAGTATG GCAATACCTG AAAGATCACG GCTTCTTCGC CATGATCATC AAGAAAAAAT ACGGCGGTTT AGAGTACTCA GCCTACGCCC AATCACGCGT ACTGCAAAAG CTTGCAGGTT TAAGCAGTGA ACTAGCATCC ACTGTAGGTG TACCTAACTC CTTAGGCCCT GGCGAACTGT TACAACACTA TGGTACGCCT GAGCAGCAAA ACCATTACCT GCCAAGGTTA GCCAAAGGTT TAGAAGTCCC TTGTTTCGCG TTAACTAGCC CAGAGGCTGG TAGCGACGCA GGTTCTATCC CTGACTTTGG TATCGTGTGT AAAGGTCAAT GGGAAGGCGA AGAAGTCTTA GGTATGCGCT TAACCTGGAA CAAGCGTTAT ATCACCCTAG CGCCGGTGGC GACGGTATTA GGTCTGGCGT TTAAACTGCG TGACCCTGAT CACCTGTTAG GCGATAAAGA AGAGCTGGGC ATTACCTGCG CGCTGATCCC AACTGACGTT GAAGGCGTTG AAACAGGTCG TCGTCACTTC CCGCTGAACT GTATGTTCCA AAACGGTCCT ACTCGCGGTA AAGACGTATT CGTCCCATTA AGCTTTATCA TCGGTGGTCC GAAAATGGCT GGCCAAGGCT GGCGCATGCT GGTTGAGTGT TTATCTGTTG GCCGTGGTAT CACGCTGCCA TCAAACTCTG CTGGTGGCGT GAAAACCGCA GCGCTTGCAA CAGGTGCGTA TGCGCGTATT CGTCGTCAAT TCAAACTGCC GATTGGTAAG TTAGAAGGGA TTGAAGAGCC AATGGCACGC ATCGGTGGTA ACGCTTATTT GATGGATGCA GTGACCTCAT TAACCACCAC AGGTATCGAC CTAGGTGAAA AACCTTCGGT TATCTCGGCA ATCGTGAAAT ATCACCTGAC CGATCGTATG CAGAAGTGCG TTATCGATGC CATGGATATC CACGGTGGTA AAGGTGTGTG CTTAGGCCCT AACAACTACT TAGGTCGTGG CTATCAAGCG GCTCCGATTG CGATTACCGT TGAAGGTGCA AACATCCTGA CACGTTCGAT GATCATCTAT GGTCAAGGTG CAATCCGTTG TCATCCTTAT GTATTGGCCG AAATGGAGTC AGCGTTTGAT ACTGAGTCTG GCCAAGGTTT AGCCAACTTC GATGCGGCCA TCTTCGGTCA TATTGGTTTT GCGACCAGTA ACTTTGTCCG TAGCTTCTGG CTAGGTCTGA CATCAAGCCG TTTCTCTAAC GCGCCATACT CAGACAAAAC CAAGCGTTAT TATCAACATA TGAACCGTTT CAGTGCCAAC TTAGCCCTGC TATCAGATTT GGCCATGGCA ACCTTAGGCG GTAACTTAAA GCGTAAAGAG CGTATTTCTG CCCGCTTAGG CGATCTGTTA AGCCAGTTAT ACCTCGCTTC TGCAACCTTA AAACGTTACC AAGATGAAGG CCGTCAAACT GACGATCTAC CACTGGTGCA ATGGGCGGTT GAAGATGCGC TGTACAAATT ACAGGCTTCA TTAGACGATT TACTGGATAA CTTCCCTATG GGTCTGGGCG GCGTGTTACG TGCCATCATG TTCCCATTCG GCCGTCCACT GAAACGTCCA AGCGATGTGT TAGATCATAA AGTGGCTAAG ATCATGCAAA CCCCATGTGA AAGCCGTGAT CGTTTAGGTA AAGGTCAGTT CTGGACTAAC TCTGAGCACA ATGCTGTGGG TATCCAAGAG CAAACGCTGA AGGATATTTT GGCCGCCGAA CCTTTATTCG ACAAAGTCTG TAAGGCCAGC GGTAAGCGTC TACCTTTCAT GTGGTTAGAT AAAGTTGCCG CCGAAGGTAA AGCCTTAGGC GTATTGAGCG ACAGCGAAGT ACAACTGTTG GAACGTGCCG AAATCGGCCG TATGAAGTCT ATCAATGTGG ATGACTTTGA CCCAGCTGAG CTGCGCCCAG AAGTCGTCGC AACGACATCA CAAGAACGCG CCGCTTAA
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Protein sequence | MTTLLWIIAM ILVLGALAYL RVSLLTATIA AAVVMTAGWT LDVVGPISWI IFLVIALPLN ISAFRQNVIS RPLMKTYRGI MPEMSSTEKE AIEAGTTWWE ADLFAGNPNW KKLHNYPVAR LSADEQAFLD GPVEEVCRMV NQHQVSHQLA DLPAEVWQYL KDHGFFAMII KKKYGGLEYS AYAQSRVLQK LAGLSSELAS TVGVPNSLGP GELLQHYGTP EQQNHYLPRL AKGLEVPCFA LTSPEAGSDA GSIPDFGIVC KGQWEGEEVL GMRLTWNKRY ITLAPVATVL GLAFKLRDPD HLLGDKEELG ITCALIPTDV EGVETGRRHF PLNCMFQNGP TRGKDVFVPL SFIIGGPKMA GQGWRMLVEC LSVGRGITLP SNSAGGVKTA ALATGAYARI RRQFKLPIGK LEGIEEPMAR IGGNAYLMDA VTSLTTTGID LGEKPSVISA IVKYHLTDRM QKCVIDAMDI HGGKGVCLGP NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLAEMESAFD TESGQGLANF DAAIFGHIGF ATSNFVRSFW LGLTSSRFSN APYSDKTKRY YQHMNRFSAN LALLSDLAMA TLGGNLKRKE RISARLGDLL SQLYLASATL KRYQDEGRQT DDLPLVQWAV EDALYKLQAS LDDLLDNFPM GLGGVLRAIM FPFGRPLKRP SDVLDHKVAK IMQTPCESRD RLGKGQFWTN SEHNAVGIQE QTLKDILAAE PLFDKVCKAS GKRLPFMWLD KVAAEGKALG VLSDSEVQLL ERAEIGRMKS INVDDFDPAE LRPEVVATTS QERAA
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