Gene Shewana3_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2323 
SymbolfadE 
ID4478080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2795424 
End bp2797871 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content49% 
IMG OID639726918 
Productacyl-CoA dehydrogenase 
Protein accessionYP_869958 
Protein GI117920766 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000178601 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.626171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTACCC TACTTTGGAT CATCGCCATG ATCTTAGTGC TAGGAGCCCT AGCTTACCTT 
CGGGTATCTT TGCTCACTGC CACTATTGCA GCCGCTGTTG TGATGACAGC CGGATGGACA
CTCGATGTTG TCGGCCCTAT CTCTTGGATT ATCTTCCTGG TGATCGCGCT GCCCCTCAAT
ATCAGTGCAT TTAGACAAAA TGTTATCAGT CGCCCACTGA TGAAGACCTA CCGTGGCATC
ATGCCCGAAA TGTCTTCTAC CGAAAAAGAA GCGATTGAAG CTGGTACCAC TTGGTGGGAA
GCCGATCTGT TTGCGGGTAA CCCAAACTGG AAAAAACTCC ACAACTATCC TGTCGCTCGT
TTAAGTGCCG ATGAGCAAGC CTTCTTAGAC GGCCCCGTTG AAGAAGTGTG CCGCATGGTG
AATCAACACC AAGTATCACA CCAACTGGCT GATTTGCCTG CTGAAGTATG GCAATACCTG
AAAGATCACG GCTTCTTCGC CATGATCATC AAGAAAAAAT ACGGCGGTTT AGAGTACTCA
GCCTACGCCC AATCACGCGT ACTGCAAAAG CTTGCAGGTT TAAGCAGTGA ACTAGCATCC
ACTGTAGGTG TACCTAACTC CTTAGGCCCT GGCGAACTGT TACAACACTA TGGTACGCCT
GAGCAGCAAA ACCATTACCT GCCAAGGTTA GCCAAAGGTT TAGAAGTCCC TTGTTTCGCG
TTAACTAGCC CAGAGGCTGG TAGCGACGCA GGTTCTATCC CTGACTTTGG TATCGTGTGT
AAAGGTCAAT GGGAAGGCGA AGAAGTCTTA GGTATGCGCT TAACCTGGAA CAAGCGTTAT
ATCACCCTAG CGCCGGTGGC GACGGTATTA GGTCTGGCGT TTAAACTGCG TGACCCTGAT
CACCTGTTAG GCGATAAAGA AGAGCTGGGC ATTACCTGCG CGCTGATCCC AACTGACGTT
GAAGGCGTTG AAACAGGTCG TCGTCACTTC CCGCTGAACT GTATGTTCCA AAACGGTCCT
ACTCGCGGTA AAGACGTATT CGTCCCATTA AGCTTTATCA TCGGTGGTCC GAAAATGGCT
GGCCAAGGCT GGCGCATGCT GGTTGAGTGT TTATCTGTTG GCCGTGGTAT CACGCTGCCA
TCAAACTCTG CTGGTGGCGT GAAAACCGCA GCGCTTGCAA CAGGTGCGTA TGCGCGTATT
CGTCGTCAAT TCAAACTGCC GATTGGTAAG TTAGAAGGGA TTGAAGAGCC AATGGCACGC
ATCGGTGGTA ACGCTTATTT GATGGATGCA GTGACCTCAT TAACCACCAC AGGTATCGAC
CTAGGTGAAA AACCTTCGGT TATCTCGGCA ATCGTGAAAT ATCACCTGAC CGATCGTATG
CAGAAGTGCG TTATCGATGC CATGGATATC CACGGTGGTA AAGGTGTGTG CTTAGGCCCT
AACAACTACT TAGGTCGTGG CTATCAAGCG GCTCCGATTG CGATTACCGT TGAAGGTGCA
AACATCCTGA CACGTTCGAT GATCATCTAT GGTCAAGGTG CAATCCGTTG TCATCCTTAT
GTATTGGCCG AAATGGAGTC AGCGTTTGAT ACTGAGTCTG GCCAAGGTTT AGCCAACTTC
GATGCGGCCA TCTTCGGTCA TATTGGTTTT GCGACCAGTA ACTTTGTCCG TAGCTTCTGG
CTAGGTCTGA CATCAAGCCG TTTCTCTAAC GCGCCATACT CAGACAAAAC CAAGCGTTAT
TATCAACATA TGAACCGTTT CAGTGCCAAC TTAGCCCTGC TATCAGATTT GGCCATGGCA
ACCTTAGGCG GTAACTTAAA GCGTAAAGAG CGTATTTCTG CCCGCTTAGG CGATCTGTTA
AGCCAGTTAT ACCTCGCTTC TGCAACCTTA AAACGTTACC AAGATGAAGG CCGTCAAACT
GACGATCTAC CACTGGTGCA ATGGGCGGTT GAAGATGCGC TGTACAAATT ACAGGCTTCA
TTAGACGATT TACTGGATAA CTTCCCTATG GGTCTGGGCG GCGTGTTACG TGCCATCATG
TTCCCATTCG GCCGTCCACT GAAACGTCCA AGCGATGTGT TAGATCATAA AGTGGCTAAG
ATCATGCAAA CCCCATGTGA AAGCCGTGAT CGTTTAGGTA AAGGTCAGTT CTGGACTAAC
TCTGAGCACA ATGCTGTGGG TATCCAAGAG CAAACGCTGA AGGATATTTT GGCCGCCGAA
CCTTTATTCG ACAAAGTCTG TAAGGCCAGC GGTAAGCGTC TACCTTTCAT GTGGTTAGAT
AAAGTTGCCG CCGAAGGTAA AGCCTTAGGC GTATTGAGCG ACAGCGAAGT ACAACTGTTG
GAACGTGCCG AAATCGGCCG TATGAAGTCT ATCAATGTGG ATGACTTTGA CCCAGCTGAG
CTGCGCCCAG AAGTCGTCGC AACGACATCA CAAGAACGCG CCGCTTAA
 
Protein sequence
MTTLLWIIAM ILVLGALAYL RVSLLTATIA AAVVMTAGWT LDVVGPISWI IFLVIALPLN 
ISAFRQNVIS RPLMKTYRGI MPEMSSTEKE AIEAGTTWWE ADLFAGNPNW KKLHNYPVAR
LSADEQAFLD GPVEEVCRMV NQHQVSHQLA DLPAEVWQYL KDHGFFAMII KKKYGGLEYS
AYAQSRVLQK LAGLSSELAS TVGVPNSLGP GELLQHYGTP EQQNHYLPRL AKGLEVPCFA
LTSPEAGSDA GSIPDFGIVC KGQWEGEEVL GMRLTWNKRY ITLAPVATVL GLAFKLRDPD
HLLGDKEELG ITCALIPTDV EGVETGRRHF PLNCMFQNGP TRGKDVFVPL SFIIGGPKMA
GQGWRMLVEC LSVGRGITLP SNSAGGVKTA ALATGAYARI RRQFKLPIGK LEGIEEPMAR
IGGNAYLMDA VTSLTTTGID LGEKPSVISA IVKYHLTDRM QKCVIDAMDI HGGKGVCLGP
NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLAEMESAFD TESGQGLANF
DAAIFGHIGF ATSNFVRSFW LGLTSSRFSN APYSDKTKRY YQHMNRFSAN LALLSDLAMA
TLGGNLKRKE RISARLGDLL SQLYLASATL KRYQDEGRQT DDLPLVQWAV EDALYKLQAS
LDDLLDNFPM GLGGVLRAIM FPFGRPLKRP SDVLDHKVAK IMQTPCESRD RLGKGQFWTN
SEHNAVGIQE QTLKDILAAE PLFDKVCKAS GKRLPFMWLD KVAAEGKALG VLSDSEVQLL
ERAEIGRMKS INVDDFDPAE LRPEVVATTS QERAA