Gene Shewana3_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2318 
Symbol 
ID4478075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2791094 
End bp2791942 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content46% 
IMG OID639726913 
Producthypothetical protein 
Protein accessionYP_869953 
Protein GI117920761 
COG category 
COG ID 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000759583 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAA AATTCATAGC ACTTGTGGGC GCGCTGGCAT CGATTAGCAT TTTGCTTGGT 
GGTTGCAGTG CCTTTTTCAA CGGTAACACC ACCGAAAAAA ATGTGGTGTC CAGCAGTCTG
GTTGAATATC TCTATCCCGA CGATAAACAA CGTGAGGCGC AGCAACCCAG TATCCCTGTG
CTGCGTCTTC CCATCACGGT CGGCATTGCC TTTTTACCTT CCACCCATTG GCAATTCGAA
GCCCTCGATA GCAGCTCGCA AATCGCCTTG CTGGATAAAG TGAAACAATC CTTTGTTAAA
TATGACTTTA TTGATCGTAT CGAATTAATC CCCAGCACTT ACCTTAAAAA TGGCAAAGGT
TTTAGTACCT TGCAGCAGGT CGCCCGCTTG CACGATGTCG ATGTGATGGC GCTAGTGTCT
TACGATCAAC TGTTACAAAG CAGCGAGAAT AAGGCTTCAC TGCTGTATTG GACTATAGTC
GGCATGTATA TGGTGCCCGG TAATGAAAAC GCGATCCAAA CCTTTGTCGA TACCGCCGTA
TTTGATATGC GCAGCCAAAA GATGTTGTTC AGAGCGCCCG GTATTAATCA ACTTACCGAC
ACGTCAACCG CGGTGAGCGT CACCAATGTG TTACGTGAAA AATCCACCGA AGGCTTTGAG
CTCGCGGTAA ACGATATGAT CACTAATTTA GACGCCGAAT TAGCCCGCTT TAAAACCCGC
GTGAAAGAAG AACATATTGC AACCATTGAA CATAAACAAG GTTATAGCGG TGGTGGCAGT
TTATCCCTAT TAATCCTTTC GCTACTGGGC ATATTTGCAC TTCGCCGTAT AACTATCTGC
CGAGAATAG
 
Protein sequence
MKTKFIALVG ALASISILLG GCSAFFNGNT TEKNVVSSSL VEYLYPDDKQ REAQQPSIPV 
LRLPITVGIA FLPSTHWQFE ALDSSSQIAL LDKVKQSFVK YDFIDRIELI PSTYLKNGKG
FSTLQQVARL HDVDVMALVS YDQLLQSSEN KASLLYWTIV GMYMVPGNEN AIQTFVDTAV
FDMRSQKMLF RAPGINQLTD TSTAVSVTNV LREKSTEGFE LAVNDMITNL DAELARFKTR
VKEEHIATIE HKQGYSGGGS LSLLILSLLG IFALRRITIC RE