Gene Shewana3_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2306 
SymbolasnC 
ID4478063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2770524 
End bp2771924 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content51% 
IMG OID639726901 
Productasparaginyl-tRNA synthetase 
Protein accessionYP_869941 
Protein GI117920749 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID[TIGR00457] asparaginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000186406 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTG CATCGGTCGC TTCTGTATTT AAAGGTGAGC ACGCAGTTGG TTCGACAGTC 
ACAGTCCGTG GCTGGGTCAG AACCCGTCGT GACTCGAAAG CTGGCATCTC TTTTTTAGCT
GTCTATGACG GCTCCTGCTT TAATCCTATT CAAGGTGTTG TGCCAAATAG CTTAGAAAAT
TACGACAACG AAGTGTTAAA GCTGACAGCT GGCTGCTCTG TGATCGTAAC CGGTGAGATT
GTGGAATCTC CTGGCGCTGG CCAAGCCTAC GAGCTGCAAG TCACACACGT TGAAGTGACG
GGTTGGGTCG AAGATCCAGA CACTTACCCA ATGGCGGCTA AGCGTCACTC AATCGAGCAT
TTACGCGAAC TGGCCCACTT ACGCCCACGT ACCAACATCA TTGGTGCCGT TGCCCGCGTA
CGTAACTGTT TGTCTCAAGC GATTCACCGT TTCTACCACG AAAATGGTTT CGTGTGGGTA
TCTACACCGC TGATCACCGC ATCAGACTGT GAAGGCGCGG GTGAAATGTT CCGTGTCTCC
ACACTGGACA TGGAAAACCT GCCACGCACC AGCGATGGCA AAGTAGACTA TGACAAAGAC
TTCTTCGGTA AAGAGGCATT CTTAACCGTA TCGGGCCAGT TGAACGGCGA AACCTACGCC
TGTGCCCTGT CAAAAATCTA TACCTTTGGC CCGACGTTCC GTGCTGAAAA CTCAAACACC
AGCCGCCACT TAGCGGAATT CTGGATGGTT GAGCCTGAAG TGGCGTTCGC GACCTTAAGC
GATATCGCAA GCCTTGCCGA AGGCATGCTG AAATACGCCT TTAACGCCGT ATTAGCTGAA
CGTATGGACG ATTTACAATT CTTCGCCCAG CACGTGGATA AAACCGTGAT TGAGCGTCTG
CAGTCTTTCG TATCGAGTGA TTTCGCCCAG GTAGATTACA CAGATGCAGT AGACATTCTG
CAAAAATGTG GTCGTGAGTT CGAATTCCCA GTGTCTTGGG GTATCGACTT ATCCTCTGAG
CACGAGCGTT ATCTGGCCGA AGAGCACTTC AAAGCCCCTG TGGTTGTGAA GAACTATCCA
AAAGATATCA AAGCCTTCTA CATGCGCCTT AACGAAGACG GTAAAACCGT TGCCGCGATG
GACGTGTTAG CCCCAGGCAT AGGTGAAATC ATCGGTGGTT CACAACGTGA AGAGCGTTTA
GACGTGCTGG ATATGCGTTT AGAAGAAATG GATCTGAATA AAGAAGATTA CTGGTGGTAT
CGCGATCTGC GCCGTTACGG CACAGTGCCA CACTCAGGTT TCGGTCTGGG CTTCGAGCGT
TTGGTGTCTT ACGTAACGGG CGTATCGAAC ATCCGTGACG TGATCCCATT CCCACGCGCG
CCACGCACTG CGAACTTCTA A
 
Protein sequence
MSIASVASVF KGEHAVGSTV TVRGWVRTRR DSKAGISFLA VYDGSCFNPI QGVVPNSLEN 
YDNEVLKLTA GCSVIVTGEI VESPGAGQAY ELQVTHVEVT GWVEDPDTYP MAAKRHSIEH
LRELAHLRPR TNIIGAVARV RNCLSQAIHR FYHENGFVWV STPLITASDC EGAGEMFRVS
TLDMENLPRT SDGKVDYDKD FFGKEAFLTV SGQLNGETYA CALSKIYTFG PTFRAENSNT
SRHLAEFWMV EPEVAFATLS DIASLAEGML KYAFNAVLAE RMDDLQFFAQ HVDKTVIERL
QSFVSSDFAQ VDYTDAVDIL QKCGREFEFP VSWGIDLSSE HERYLAEEHF KAPVVVKNYP
KDIKAFYMRL NEDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDMRLEEM DLNKEDYWWY
RDLRRYGTVP HSGFGLGFER LVSYVTGVSN IRDVIPFPRA PRTANF