Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2302 |
Symbol | |
ID | 4478059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2766330 |
End bp | 2767874 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726897 |
Product | fumarase |
Protein accession | YP_869937 |
Protein GI | 117920745 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00101336 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCTC ACCATGAAAC GTCTGAAAAT GTAGTGATTA AACAAGCCGA CTTTATTGAA AGTGTGGCCG ATGCCCTGCA ATACATCTCC TATTATCATC CCAAAGATTT TGTGGATGCC ATGAGCGAAG CTTATGAGCG TGAGCAAAGT GCGGCGGCGA AGGATGCGAT TGCGCAAATT TTGATTAACT CGCGTATGTC TGCCGAAGGT AAACGTCCAC TGTGTCAAGA CACGGGTATT GTGACCACCT TCGTTAAGAT TGGTATGGGG GTTAAGTGGG ACAAAACCGA TATGACTGTG CAACAAATGG TCGATGAAGG TGTGCGTCGT GCTTATACCA ATCCAGATAA CCCACTGCGT GCATCGATTG TGGCCGATCC TGCGGGTAGC CGTAAAAACA CCAAAGACAA CACGCCATCC GTCGTGCATA TCGATATGGT GCCAGGCAAT CACATTGAAG TCGCTATCGC GGCCAAGGGC GGCGGCAGTG AAAACAAAGC CAAGATGGTG ATGTTAAACC CATCTGACGA TATCGCCGCT TGGGTTGAAA AAACGCTGCC AACCATGGGC GCGGGCTGGT GTCCTCCAGG TATGCTTGGC ATCGGTATTG GCGGCACCGC TGAGAAAGCG GCCGTACTCG CGAAAGAAGC ACTGATGGAA AGCGTGGATA TCCATGAGTT AATGGCGCGC GGTGCAGAAA CCAGCGAAGA AAAACTGCGT TTAGACATTT TCGAGCGTGC TAACAACCTT GGTATTGGTG CGCAGGGTCT TGGCGGTTTA ACCACAGTGT TAGACGTGAA AATCAAATCT GCACCTACTC ATGCAGCATC AAAACCTGTG GTGATGATCC CGAACTGCGC GGCAACTCGT CACGTACACT TCCATTTAGA TGGTTCGGGC CCTGCTGATC TTGCGCCGCC TACACTCAGC GACTGGCCAG AAATCACCCG CGAAGTGGGC AGCGATGTGC GACGCGTTAA CTTAGACACA GTCACTCAAG CCGATATCGA GCAGTGGAAG AGCGGTGAAA CCATTCTGTT AAGCGGTAAA ATGCTCACCG GCCGTGATGC TGCCCATAAA CGTATCCAAA GCCTGATTGA AAGCGGCGAA GGCTTACCAG AAGGCGTCGA CTTTACTGGC AAGTTTATCT ACTACGTGGG CCCTGTTGAC CCAGTCGGTA ACGAAGTCGT GGGTCCTGCT GGCCCAACAA CCGCGACCCG TATGGACAAG TTCACCGATC TGATGCTGGA TAAAACTGGC CTGATGGGCA TGATTGGTAA GGCTGAACGT GGTCCAGCGA CCGTTGAGTC TATCAAGAAG CACAAAGCTG TGTACCTGAT GGCTGTGGGC GGCGCGGCTT ACTTAGTGTC GAAAGCCATT AAGAAATCCC GCGTGGTGGC CTTTGCCGAC TTAGGTATGG AAGCAATTTA CGAGTTTGAC GTACAAGATA TGCCAGTTAC TGTGGCGGTG GATTCAAACG GCGTGAATGC CCATGAAACT GGCCCTGCGA TTTGGAAAGT GAATATCGCT AACGCCAAAG CCTAA
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Protein sequence | MSSHHETSEN VVIKQADFIE SVADALQYIS YYHPKDFVDA MSEAYEREQS AAAKDAIAQI LINSRMSAEG KRPLCQDTGI VTTFVKIGMG VKWDKTDMTV QQMVDEGVRR AYTNPDNPLR ASIVADPAGS RKNTKDNTPS VVHIDMVPGN HIEVAIAAKG GGSENKAKMV MLNPSDDIAA WVEKTLPTMG AGWCPPGMLG IGIGGTAEKA AVLAKEALME SVDIHELMAR GAETSEEKLR LDIFERANNL GIGAQGLGGL TTVLDVKIKS APTHAASKPV VMIPNCAATR HVHFHLDGSG PADLAPPTLS DWPEITREVG SDVRRVNLDT VTQADIEQWK SGETILLSGK MLTGRDAAHK RIQSLIESGE GLPEGVDFTG KFIYYVGPVD PVGNEVVGPA GPTTATRMDK FTDLMLDKTG LMGMIGKAER GPATVESIKK HKAVYLMAVG GAAYLVSKAI KKSRVVAFAD LGMEAIYEFD VQDMPVTVAV DSNGVNAHET GPAIWKVNIA NAKA
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