Gene Shewana3_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2290 
Symbol 
ID4478047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2754407 
End bp2755432 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content50% 
IMG OID639726885 
Producthypothetical protein 
Protein accessionYP_869925 
Protein GI117920733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000825064 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTACGTC AACTCGCGGT CTCTATCGCT ACACTTATTG CACTTTCACA CAGTTCACTT 
GCCCGTGCTG AAGCTTGGTT CGAGGTTGAA GTCTATATTT TTGAACGCCA AAGCCAGTCG
ACCGAACAAT GGCCGATGGC GCCAATTGAG ACCAAAACCA ACCGCGCTAT CGATCTGATT
TCACCGGTTG TGGGTCAAGC TGTGCTCTCC ATGAGCAATG AATCTGCGCC CTGCACCTTA
GTGTATGACG CCGATGCTAA TAGCCATTGC GCTGAAAATA CCAGCACAGG TACGAATACG
GACGCCACTC CCGAGATGAG TAACGGCGGT ACTTTAGCCA TTTCAGGCCC AAGCACTGCA
AGCTCAAATG CGGTAACCAG CTATCGCTAT CCGAGTGTGA TCCCATCGGA AATCGGCAGT
GGTAGCCAAG CCTACGCGTC TCAAGGCAGT GGCCCAGTAT TACTCGCCAG CAGCCAAGGC
CAATTTGCCA GCATCATCAA CAGCCTATCG AGAGAGCGTG GTAACCGCAG CTTACTGCAT
ATGACATGGC AACAACCTAT GATGGGCAAG AGTGGCTCAG TGCCCATTCG CCTGTTTGCG
GGTAAAGATT ATTCCGCCAG TTATCACTTC GATGGTCGTC AAATTGTGCA ACAAGCCATG
GCCACCTCAA TGCAAGGTGC TAACGGCACG ACTGGCATGA TGGCTGAAAC AGCGCCATTA
CAGCCCTCTC CCGTGTGGCA ACTCGATGGC ACGCTCAATA TTTATCTTAG CCATTATCTG
TATATCGAAA CCGCGCTCAA TTTGCGTAAA GAAGGCCGCA AATTGATGCC TGTGGCAGCC
GATGAAGCGA GCATGAATAC AGCAACAAGT ACTGCCGTAA CCCCAGCAAA AGTGATGACA
CCTTATTTAA TGTCTATTCC GTTGGAACAA AATCGTCGAG TGAAAAGTGA TGAGATCCAC
TATCTCGATC ATCCCGAAAT GGGCATGGTG ATCCAAATCC GTAAGATGGC GCAACCTAAC
GCTTAA
 
Protein sequence
MLRQLAVSIA TLIALSHSSL ARAEAWFEVE VYIFERQSQS TEQWPMAPIE TKTNRAIDLI 
SPVVGQAVLS MSNESAPCTL VYDADANSHC AENTSTGTNT DATPEMSNGG TLAISGPSTA
SSNAVTSYRY PSVIPSEIGS GSQAYASQGS GPVLLASSQG QFASIINSLS RERGNRSLLH
MTWQQPMMGK SGSVPIRLFA GKDYSASYHF DGRQIVQQAM ATSMQGANGT TGMMAETAPL
QPSPVWQLDG TLNIYLSHYL YIETALNLRK EGRKLMPVAA DEASMNTATS TAVTPAKVMT
PYLMSIPLEQ NRRVKSDEIH YLDHPEMGMV IQIRKMAQPN A