| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2287 |
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| Symbol | |
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| ID | 4478044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2748891 |
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| End bp | 2750123 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639726882 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_869922 |
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| Protein GI | 117920730 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00103556 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTC GATTTCCTCT CTACGTTGGT TACCGTTATT GGCGGGCCAG AAAAGCAAAC
GCCTTTGCTT CTTTTATTAC CTTATTTGCC GTTTCGGGCA TTTTTTTAGG GGTGGCGGCC
TTAATCGTGG TCAGCTCGGT GATGAATGGC CTCGAAGGGC AATTAAAGCA GCGCATTTTA
GGCGCAGTAC CTCAATTGAC TGTGGTGACT GAGGCGCCCT TAAGTGATTG GACTATACCT
GCGGACAAAC TCAAAGCCTT GCCGGGCGTG CAGGGCGTGA CGCCGAGCGT GTCGACCCAA
GCCATGGTGC AATCGGCGGC GAATATCCGC GCCGTGCAAG TGTTTGGGGT GTTTCCTGAG
CTTGCCGAAA AACTCTCAAT GGTGGCGCAG CATACCTATT CGGGCGCATT TAACGAGTTA
ACTAGCGGCC AATATAAAGT CATCTTAGGC AGCGAGCTTG CGCGCCAATT AAAGGTGAGC
CCAGGTGATA CTGTGCGTCT GTTAAGCGGC GATGGCGTGG TATATTCGCC GCTCGGCCCA
GTCCCTAGCC AACGCAAGTT TTTAGTGTCC GCCGTGTTTG AGATGGGCTC ACAGGTGGAT
GCGGGCGTCG CATACATTCA TTACCAAGAT GCCAAGCGCT TAATGCGTCA ACCGAGCGAT
GAAATCAATC AGTTACGGCT GTATCTGAGC GATCCTTTTA TGGCCCCCGC ACTGGCTAAG
GATGTAAAGC AGGTTCTTAC CCAGCAGGGT ATAGAGGCGA CAACCAGTGA CTGGCGCGAC
ACCTATGGTC ATCTGTTTAG TGCCGTGAAG ATGGAAAAAA ACATGATGTC GCTGATGCTG
AGCCTGATTG TAGCCGTGGC GGCGTTTAAT ATAGTGTCGG CGCTGGTGAT GATGGTGGTG
GATAAAACCA CCGACGTGGC GGTACTCAAA ACCCAAGGCT TACGTACCTC GGCGGTGATG
GGCATTTTTG TGGTGCAAGG GTTATTGAAT GCGGTATTAG GTTTAGTACT GGGGCTGGTG
GTCGGTATTC TGCTCACCCT TAATTTGAAT GGCATTATGG CGACCCTAGG GATTTCCATT
TTAGGCACTG GGCAAGTGCT GCCAGTTAAA TTGGAGCTGG GCCAATTGTC GATGATTATT
GTCGGCACCT TAGTCGTGAC CTTAGTGGCG ACCCTTTACC CCGCATTGCG AGCGGCGCGG
GTGCAACCTG CCACGGCGCT GCGTTACGAA TAG
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| Protein sequence | MDLRFPLYVG YRYWRARKAN AFASFITLFA VSGIFLGVAA LIVVSSVMNG LEGQLKQRIL
GAVPQLTVVT EAPLSDWTIP ADKLKALPGV QGVTPSVSTQ AMVQSAANIR AVQVFGVFPE
LAEKLSMVAQ HTYSGAFNEL TSGQYKVILG SELARQLKVS PGDTVRLLSG DGVVYSPLGP
VPSQRKFLVS AVFEMGSQVD AGVAYIHYQD AKRLMRQPSD EINQLRLYLS DPFMAPALAK
DVKQVLTQQG IEATTSDWRD TYGHLFSAVK MEKNMMSLML SLIVAVAAFN IVSALVMMVV
DKTTDVAVLK TQGLRTSAVM GIFVVQGLLN AVLGLVLGLV VGILLTLNLN GIMATLGISI
LGTGQVLPVK LELGQLSMII VGTLVVTLVA TLYPALRAAR VQPATALRYE
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