Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2280 |
Symbol | |
ID | 4477705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2742056 |
End bp | 2743270 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726875 |
Product | cysteine desulfurase |
Protein accession | YP_869915 |
Protein GI | 117920723 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0344556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTC CTATCTATTT AGATTATGCC GCCACCACGC CAGTTGATCC GCGAGTCGCG GAAAAAATGT TCCAATACAT GACGATGGAT GGCATCTTCG GTAACCCAGC ATCACGTTCT CACCGTTATG GCTGGCAAGC GGAAGAAGCG GTGGATGTGG CACGCAGCCA AGTGGCTGAT CTGATCAATG CCGATCACCG TGAAATCGTG TTTACCTCAG GTGCAACCGA ATCAAACAAC CTGGCGATCA AAGGCGTAGC GCATTTCTAC AATAAGAAAG GCAAGCACAT CATCACCAGT AAGACTGAAC ATAAAGCGGT ACTCGATACC TGCCGTCAGC TTGAGCGTGA AGGCTTTGAA GTCACTTACT TAGAGCCAGA AGCCAACGGC ATTATTCCGA TGGAACGTTT AGAAGCGGCG ATGCGCGATG ACACCATTCT TGTCAGCATC ATGCATGTGA ATAACGAAAT CGGTGTGATC CATGATGTGG ATGCCATCGG TGAGTTATGC CGCTCAAAAG GCATTATCTT CCATATGGAT GCGGCACAAA GCGCGGGTAA ATTACCTATC GATGTACAAA CGACTAAGGT CGACCTGATC TCTATCTCTG GCCACAAAAT GTATGGTCCA AAAGGGATTG GTGCTTTGTA CGTTCGCCGT AAGCCACGCA TTCGCTTAGA AGCCCAAATG CACGGCGGTG GTCATGAGCG TGGTATGCGC AGTGGTACAC TGGCGACTCA CCAAATCGTC GGTTTAGGTG AAGCGGCTGC AATCGCAAAA GCTGAAATGG CAACGGACAA CGCCCGTATC GCCAAGCTGC GTGACAAGTT ATGGAATGGC ATCAAGCACA TCGAAGAGAC GTATGTAAAC GGCGACATGA CTCACCGTGT GAGCGGTAGC CTGAACGTCA GCTTCAACTA TGTTGAAGGT GAGTCGCTGA TGATGGCATT AAAAGATTTA GCGGTTTCAT CGGGTTCTGC CTGTACTTCA GCCAGTCTCG AGCCAAGCTA CGTGTTACGT GCGCTCGGTT TAAATGATGA AATGGCGCAT AGCTCAATTC GTTTCTCAAT CGGTCGTTTT ACCACTGAAG AAGAAATCGA CCACGCTATC GAAACTATTA CACAATCTAT TGATAAATTA AGAGAAATGT CTCCATTGTG GGAGATGTTC AAAGATGGCA TCGACCTGAA TCAGGTCCAG TGGGCCCATC ATTAA
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Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMFQYMTMD GIFGNPASRS HRYGWQAEEA VDVARSQVAD LINADHREIV FTSGATESNN LAIKGVAHFY NKKGKHIITS KTEHKAVLDT CRQLEREGFE VTYLEPEANG IIPMERLEAA MRDDTILVSI MHVNNEIGVI HDVDAIGELC RSKGIIFHMD AAQSAGKLPI DVQTTKVDLI SISGHKMYGP KGIGALYVRR KPRIRLEAQM HGGGHERGMR SGTLATHQIV GLGEAAAIAK AEMATDNARI AKLRDKLWNG IKHIEETYVN GDMTHRVSGS LNVSFNYVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF TTEEEIDHAI ETITQSIDKL REMSPLWEMF KDGIDLNQVQ WAHH
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