Gene Shewana3_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2274 
Symbol 
ID4477699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2737428 
End bp2738327 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content50% 
IMG OID639726869 
ProductSSU ribosomal protein S6P modification protein 
Protein accessionYP_869909 
Protein GI117920717 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR00768] alpha-L-glutamate ligases, RimK family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000086692 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG CGATCCTATC GCAAGGGCCT GAGCTATATT CCACAAAGCG ACTCGTTGAG 
GCTGCGACAT TACGTGGTCA CGAAGTCAAA GTGATCAACC CGCTCGAATG CTATATGAAC
ATCAATATGC GCCAGTCGAG CATTCATATT GGTGGGGAAG AGTTACCGCC TTTTGATGCG
GTTATTCCGC GTATCGGTGC TTCGATTACT TTTTATGGCT CAGCTGTGCT GCGCCAGTTT
GAGATGATGG GCGTATATGC GCTCAATGAT TCTGTCGGCA TTTCTCGCTC GCGCGATAAG
CTACGTTCGA TGCAGTTAAT GTCACGCCGT GGTATCGGTC TGCCAATTAC TGGCTTTGCC
AATAAGCCGA GTGATATTCC TGATCTCATC GACATGGTGG GTGGCGCGCC GTTAGTGATC
AAATTGCTTG AGGGCACGCA GGGCATTGGG GTGGTGTTAG CCGAAACCCG CAAGGCGGCA
GAGAGTGTGA TTGAAGCTTT TATGGGATTA AAAGCCAACA TCATGGTGCA GGAATACATT
AAAGAAGCCA ATGGCGCCGA CATTCGCTGC TTTGTGCTGG GCGATAAAGT GATTGCGGCA
ATGAAACGCC AAGCTATGCC AGGGGAGTTT CGCTCAAACT TACACCGTGG CGGTACTGCA
AGTTTAGTTA AATTGACCCC AGAAGAGCGT TCGGTGGCAA TTCGTGCGGC CAAAACCATG
GGACTCAATG TCGCTGGGGT GGATTTATTG CGTTCTAATC ATGGCCCTGT GGTGATGGAA
GTGAATTCTT CGCCAGGCCT TGAAGGGATA GAAGGGGCAA CCGCAAAAGA TGTCGCCGGT
GCCATTATTG AGTTTGTTGA AAAGAATGCC CTCAAGGCAA AAAAGCCCAC TCAAGCGTAG
 
Protein sequence
MRIAILSQGP ELYSTKRLVE AATLRGHEVK VINPLECYMN INMRQSSIHI GGEELPPFDA 
VIPRIGASIT FYGSAVLRQF EMMGVYALND SVGISRSRDK LRSMQLMSRR GIGLPITGFA
NKPSDIPDLI DMVGGAPLVI KLLEGTQGIG VVLAETRKAA ESVIEAFMGL KANIMVQEYI
KEANGADIRC FVLGDKVIAA MKRQAMPGEF RSNLHRGGTA SLVKLTPEER SVAIRAAKTM
GLNVAGVDLL RSNHGPVVME VNSSPGLEGI EGATAKDVAG AIIEFVEKNA LKAKKPTQA