Gene Shewana3_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2235 
Symbol 
ID4478631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2687277 
End bp2688842 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content49% 
IMG OID639726830 
Producthypothetical protein 
Protein accessionYP_869870 
Protein GI117920678 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0248668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.25441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTTT CTCAATCTTT TTCCCTCGCC CAGATCATCG GTCTTCTCGC CGTGGCCTTT 
TTAGGACTGT TAATCGGTGC CCTACTCAAT CAACGTCTCA CCCGCTCACG CTGGCAACAG
TTTAAAGACG AATTAGAGCA AGAAATGCGG CAAGTAAACG AAGACGCCGA GCTCTCCCTC
GCCCAGCAGC AAGTTTTAGT CGACGACAAA GATAACCAAC TGCGCCAATG CCAACAACGC
TTAGAGCAAA AGATAGAACA ACTGGGTAAA GCCGAAGCCA TGGCCGAGCG CCTGCCGAGT
ATTGAGCAGC AACTCGCCGA CAGCCATCGC CGCCAACTCG AGCTCCAACT GGCCTTATCT
AAATCCAATG CGATGCAACA GACTATTCAG GCCAAGGCCG ATGCTCAGCA ATCCGCCATG
CAGGAAAAAA TCGCCACCTT AGAAATGGCC GAAGTTCGCC TACAAACTCA GTTTGAAAAC
CTTGCCAATC GAATTTTCGA AGAGCGCAGC GAAAGCTTTA AGCATCAAAA CGCCAATCAG
TTAGAAGGTG TGCTCGGGCC GTTGAAGCAA CAGTTAGAAG GCTTTAGACA GCAAATTCGC
GAATCCTACA ACCATGAGCA GTCGGAGCGC AGCGCCCTCA AACATCAATT AGAACATCTG
CGCGAGCTCA ATTTAAAAAT GAGTCAGGAT GCCATTAACC TGACCAAGGC CTTAAAGGGC
GATAACAAGC AGCAAGGCAA CTGGGGCGAA GTGATTTTAG ACCGCGTGCT GCAAGAAAGC
GGCCTGCGCG AAGGTCACGA ATATCACACC CAGCAGGATC TGAAGGACGA CAGCGGCAAA
CGCTTTAAAC CCGATGTGAT CGTGCATTTG CCTGAAAATA AAGACGTGGT TATCGATGCC
AAGATGTCGC TCATCAGCTA CGAGCGCTAT TTTAATAGCG AAGATCCGCT GGTGCGTGAA
CAGGCCATCA ATGAGCATGT TTTATCGATC CGTAATCATA TTAAGGGCTT GAGTCAAAAG
GATTATCAGC GTTTACACGG GCTCAAAAGC TTAGATTACG TGTTGATGTT TATTCCGATT
GAACCCGCGT TCTTACTAGC CCTAGAGCAT GATCCAAGTC TTGTTAACTT TGCCCTCGAG
CAAAATATTA TGCTGGTCAG TCCAACCAAC CTCTTGGTTG CCCTGCGAAC AATCAATAAT
ATCTGGCGTT ACGAGTATCA AAACCAGCAC GCCCAAACCA TTGCCAAACA GGCGGGTCGG
ATCTACGACA AACTCTGTGG CTACCTCGAC GATATGGAAA AACTCGGCCG CGCTCTGGAT
AACGCCGAAA AAACCTATCA CAGTGCCATG AACAAATTGT CATCGGGCAA AGGCAATTTA
GTGCGTCAAG CACATTTAAT GCAGCAACTA GGTGTTGATA CCAGCAAGCA ACTCGATAAG
ATGTTACTTG AGAAGGCGCT TAACGAAGCC TTAGACGAGA GTGATGCGCA GGACAGCGGT
GATAATCAAA CTCATCGCGA TACGCTTTTG ACCCATACTG AGGATGCCAC CGCACTCGAA
CAATAA
 
Protein sequence
MPFSQSFSLA QIIGLLAVAF LGLLIGALLN QRLTRSRWQQ FKDELEQEMR QVNEDAELSL 
AQQQVLVDDK DNQLRQCQQR LEQKIEQLGK AEAMAERLPS IEQQLADSHR RQLELQLALS
KSNAMQQTIQ AKADAQQSAM QEKIATLEMA EVRLQTQFEN LANRIFEERS ESFKHQNANQ
LEGVLGPLKQ QLEGFRQQIR ESYNHEQSER SALKHQLEHL RELNLKMSQD AINLTKALKG
DNKQQGNWGE VILDRVLQES GLREGHEYHT QQDLKDDSGK RFKPDVIVHL PENKDVVIDA
KMSLISYERY FNSEDPLVRE QAINEHVLSI RNHIKGLSQK DYQRLHGLKS LDYVLMFIPI
EPAFLLALEH DPSLVNFALE QNIMLVSPTN LLVALRTINN IWRYEYQNQH AQTIAKQAGR
IYDKLCGYLD DMEKLGRALD NAEKTYHSAM NKLSSGKGNL VRQAHLMQQL GVDTSKQLDK
MLLEKALNEA LDESDAQDSG DNQTHRDTLL THTEDATALE Q