Gene Shewana3_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2230 
Symbol 
ID4478626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2682292 
End bp2682753 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content51% 
IMG OID639726825 
ProductMarR family transcriptional regulator 
Protein accessionYP_869865 
Protein GI117920673 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00353505 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.420745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTG CACACCCGCA TGATGCTTTA TCAGCCGCGT CCGCCCATTC TACGGATCAG 
GCCCTGAACC ATGTGATTAT TGAGTTTTAT GAAAAATTAT CATCGTGGGA GCATGCTATT
GTGCGCGATA AGGGTTTTAG CTTATCGCAG GTACACACAA TAGAGTTGTT GGGTGTGCAC
GGCGCGATGC GAATGAAGGA ACTGGCCGAC AAAATCGGCG TGACCACAGG CACGCTCACG
GTACAAATCG ATAAAATGGT CGAATCCCAG TGGGTGATGC GTCGTCCCCA TGAGAGTGAC
AGACGCTCGA TTCTGGTCGA GCTCACCGAG AAAGGTCAGG CGCTGTTCCT TGAGCATGAT
GCGCTGCATT TGCAATTAAC GACCGATCTC ACCGCTAAGA TGAGTGCAGA GGAGCGAAGC
TTACTGCTGA GTTTGCTGAC GCGGATGAAC CAAGAGTTTT AA
 
Protein sequence
MTVAHPHDAL SAASAHSTDQ ALNHVIIEFY EKLSSWEHAI VRDKGFSLSQ VHTIELLGVH 
GAMRMKELAD KIGVTTGTLT VQIDKMVESQ WVMRRPHESD RRSILVELTE KGQALFLEHD
ALHLQLTTDL TAKMSAEERS LLLSLLTRMN QEF